RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 KDM4FA0A1W2PPD8 638 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 MRPL12P52815 198 aaKnown RBP21.32■■□□□ 1
PDLIM3-212ENST00000620787 NPEPPSP55786 919 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 PREPLQ4J6C6 727 aaPredicted RBP21.32■■□□□ 1
PDLIM3-212ENST00000620787 LACTB2Q53H82 288 aaPredicted RBP21.32■■□□□ 1
PDLIM3-212ENST00000620787 ARMC9Q7Z3E5 817 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 SYCE1Q8N0S2 351 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 FUKQ8N0W3 1084 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 ATP8B4Q8TF62 1192 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 PSMD1Q99460 953 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 POTEFA5A3E0 1075 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 SLC26A4O43511 780 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 PPFIA2O75334 1257 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 POTEIP0CG38 1075 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 XRCC5P13010 732 aaKnown RBP21.32■■□□□ 1
PDLIM3-212ENST00000620787 DRD4P21917 467 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 STAT3P40763 770 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 KNOP1Q1ED39 458 aaKnown RBP21.32■■□□□ 1
PDLIM3-212ENST00000620787 TTBK2Q6IQ55 1244 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 CYB5D1Q6P9G0 228 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 POTEGQ6S5H5 508 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 POTEEQ6S8J3 1075 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 EPM2AIP1Q7L775 607 aaPredicted RBP21.32■■□□□ 1
PDLIM3-212ENST00000620787 RPAINQ86UA6 219 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 OLIG1Q8TAK6 271 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 KCNMB3Q9NPA1 279 aa21.32■■□□□ 1
PDLIM3-212ENST00000620787 UTP11Q9Y3A2 253 aaKnown RBP21.32■■□□□ 1
PDLIM3-212ENST00000620787 AKR1B1P15121 316 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 GIT2Q14161 759 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 DCAF17Q5H9S7 520 aaPredicted RBP21.31■■□□□ 1
PDLIM3-212ENST00000620787 TRIM51Q9BSJ1 452 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 HAUS2Q9NVX0 235 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 TTC7AQ9ULT0 858 aaPredicted RBP21.31■■□□□ 1
PDLIM3-212ENST00000620787 PHF20L1A8MW92 1017 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 AKAP3O75969 853 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 CCDC172P0C7W6 258 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 RDXP35241 583 aaKnown RBP21.31■■□□□ 1
PDLIM3-212ENST00000620787 SCTRP47872 440 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 CDR1P51861 262 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 C15orf52Q6ZUT6 534 aaKnown RBP21.31■■□□□ 1
PDLIM3-212ENST00000620787 VPS36Q86VN1 386 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 U2AF1L4Q8WU68 220 aaKnown RBP21.31■■□□□ 1
PDLIM3-212ENST00000620787 PSTPIP2Q9H939 334 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 SWAP70Q9UH65 585 aa21.31■■□□□ 1
PDLIM3-212ENST00000620787 RFC4P35249 363 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 GRAPQ13588 217 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 GJB7Q6PEY0 223 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 SFR1Q86XK3 245 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 PARP9Q8IXQ6 854 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 GRAPLQ8TC17 118 aaPredicted RBP21.3■■□□□ 1
PDLIM3-212ENST00000620787 CNOT10Q9H9A5 744 aaKnown RBP21.3■■□□□ 1
PDLIM3-212ENST00000620787 MCM8Q9UJA3 840 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 NR2E1Q9Y466 385 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 F8W031 263 aaPredicted RBP21.3■■□□□ 1
PDLIM3-212ENST00000620787 FGGP02679 453 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 GALCP54803 685 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 SNCBQ16143 134 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 SPDYCQ5MJ68 293 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 WLSQ5T9L3 541 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 GKAP1Q5VSY0 366 aaPredicted RBP21.3■■□□□ 1
PDLIM3-212ENST00000620787 DPP8Q6V1X1 898 aaPredicted RBP21.3■■□□□ 1
PDLIM3-212ENST00000620787 FAM228AQ86W67 206 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 LNX1Q8TBB1 728 aaPredicted RBP21.3■■□□□ 1
PDLIM3-212ENST00000620787 CCT6BQ92526 530 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 SGSM3Q96HU1 749 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 NAP1L4Q99733 375 aaKnown RBP21.3■■□□□ 1
PDLIM3-212ENST00000620787 TACO1Q9BSH4 297 aaKnown RBP21.3■■□□□ 1
PDLIM3-212ENST00000620787 CD209Q9NNX6 404 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 AMFRQ9UKV5 643 aa21.3■■□□□ 1
PDLIM3-212ENST00000620787 PDXKO00764 312 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 EIF3BP55884 814 aaKnown RBP21.29■■□□□ 1
PDLIM3-212ENST00000620787 GABPAQ06546 454 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 ERMARDQ5T6L9 678 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 DCAF12L1Q5VU92 463 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 MDM1Q8TC05 714 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 SLC35C1Q96A29 364 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 FMO2Q99518 471 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 GCNT4Q9P109 453 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 ATP8A1Q9Y2Q0 1164 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 NCANO14594 1321 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 GAKO14976 1311 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 USP17L10C9JJH3 530 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 DDX3YO15523 660 aaKnown RBP21.29■■□□□ 1
PDLIM3-212ENST00000620787 CALUO43852 315 aaPredicted RBP21.29■■□□□ 1
PDLIM3-212ENST00000620787 SLC16A2P36021 539 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 PSMC6P62333 389 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 CPLX4Q7Z7G2 160 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 SLC30A5Q8TAD4 765 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 P3H4Q92791 437 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 CENPTQ96BT3 561 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 FAM163AQ96GL9 167 aaPredicted RBP21.29■■□□□ 1
PDLIM3-212ENST00000620787 XPO6Q96QU8 1125 aaKnown RBP21.29■■□□□ 1
PDLIM3-212ENST00000620787 REEP2Q9BRK0 252 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 FAM129AQ9BZQ8 928 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 TRIM31Q9BZY9 425 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 EPB41L4BQ9H329 900 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 OSGEPQ9NPF4 335 aa21.29■■□□□ 1
PDLIM3-212ENST00000620787 ASTN1O14525 1302 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 ZBTB5O15062 677 aa21.28■■□□□ 1
PDLIM3-212ENST00000620787 BUB1BO60566 1050 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms