RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MYO5AQ9Y4I1 1855 aaKnown RBP11.26□□□□□ -0.61
VPS11-207ENST00000620429 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
VPS11-207ENST00000620429 BCRP11274 1271 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 SKIV2L2P42285 1042 aaKnown RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 PSMD7P51665 324 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 OXCT1P55809 520 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 MFSD6Q6ZSS7 791 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 LONP2Q86WA8 852 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 ATP11CQ8NB49 1132 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 RHBDL2Q9NX52 303 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 CYP39A1Q9NYL5 469 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 COL4A1P02462 1669 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 AKAP11Q9UKA4 1901 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 NTSR2O95665 410 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 SESN3P58005 492 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 MAGOHP61326 146 aaKnown RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 PUM3Q15397 648 aaKnown RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 UAP1Q16222 522 aaPredicted RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 CNPY1Q3B7I2 92 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 IFNL3Q8IZI9 196 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 RNF10Q8N5U6 811 aaKnown RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 RBBP8NLQ8NC74 664 aaPredicted RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 LINC00116Q8NCU8 138 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 SH3TC2Q8TF17 1288 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 RSPH1Q8WYR4 309 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 MAGOHBQ96A72 148 aaKnown RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 TLCD1Q96CP7 247 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 DDX27Q96GQ7 796 aaKnown RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 DHRS1Q96LJ7 313 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 GBP5Q96PP8 586 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 RAB3IPQ96QF0 476 aaPredicted RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 BLZF1Q9H2G9 400 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 CNNM2Q9H8M5 875 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 STK38LQ9Y2H1 464 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 TACC3Q9Y6A5 838 aa11.25□□□□□ -0.61
VPS11-207ENST00000620429 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
VPS11-207ENST00000620429 KCNJ18B7U540 433 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 PEX11AO75192 247 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 OAS1P00973 400 aaKnown RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 HARSP12081 509 aaKnown RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 BCAMP50895 628 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 PLOD1Q02809 727 aaPredicted RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 UBXN1Q04323 297 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 RASGRF1Q13972 1273 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 KCNJ12Q14500 433 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 TSR1Q2NL82 804 aaKnown RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 LPIN2Q92539 896 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.24□□□□□ -0.61
VPS11-207ENST00000620429 FHDC1Q9C0D6 1143 aaPredicted RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 NSRP1Q9H0G5 558 aaKnown RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 EPB41L4AQ9HCS5 686 aaPredicted RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 ZNHIT6Q9NWK9 470 aaKnown RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 CAPN11Q9UMQ6 739 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 LUC7L2Q9Y383 392 aaKnown RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 MROH7Q68CQ1 1323 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 TTC26A0AVF1 554 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 ESYT3A0FGR9 886 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 ZSCAN5CA6NGD5 496 aaPredicted RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 LGR5O75473 907 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 CCNB1P14635 433 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 ALOX15P16050 662 aaPredicted RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 CTNNA1P35221 906 aaKnown RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 SERPINB4P48594 390 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 CDK17Q00537 523 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 ADCY1Q08828 1119 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 MTMR3Q13615 1198 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 ALX1Q15699 326 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 ATXN2LQ8WWM7 1075 aaKnown RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 SPATA16Q9BXB7 569 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 MIS12Q9H081 205 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 THAP9Q9H5L6 903 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 LUC7LQ9NQ29 371 aaKnown RBP11.24□□□□□ -0.61
VPS11-207ENST00000620429 DAAM1Q9Y4D1 1078 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 MYH7BA7E2Y1 1941 aa11.24□□□□□ -0.61
VPS11-207ENST00000620429 MACROD2A1Z1Q3 448 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 MAGEA13PA6NCF6 341 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 CACNA2D1P54289 1103 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 PAK1Q13153 545 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 PARP6Q2NL67 630 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 CFAP221Q4G0U5 840 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 TCP11X2Q5H9J9 407 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 EARS2Q5JPH6 523 aaKnown RBP11.23□□□□□ -0.61
VPS11-207ENST00000620429 NFRKBQ6P4R8 1299 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 ZNF554Q86TJ5 538 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 SLC15A3Q8IY34 581 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 LRRC34Q8IZ02 419 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 KIF2BQ8N4N8 673 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 FANCBQ8NB91 859 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 ERMNQ8TAM6 284 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 UCMAQ8WVF2 138 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 IRGQQ8WZA9 623 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 ISCUQ9H1K1 167 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 VPS54Q9P1Q0 977 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 TMED5Q9Y3A6 229 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 DUSP10Q9Y6W6 482 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 ZNF831Q5JPB2 1677 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms