RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 BHMT2Q9H2M3 363 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 AZI2Q9H6S1 392 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 NRBP2Q9NSY0 501 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 PTPN22Q9Y2R2 807 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 PCDHA5Q9Y5H7 936 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 PTCH2Q9Y6C5 1203 aa8.95□□□□□ -0.98
CPNE3-209ENST00000620393 ZNF236Q9UL36 1845 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 ZNFX1Q9P2E3 1918 aaKnown RBP8.94□□□□□ -0.98
CPNE3-209ENST00000620393 MYMKA6NI61 221 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 SSBP05455 408 aaKnown RBP eCLIP8.94□□□□□ -0.98
CPNE3-209ENST00000620393 CYP11B2P19099 503 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 CCND3P30281 292 aaPredicted RBP8.94□□□□□ -0.98
CPNE3-209ENST00000620393 CTCFP49711 727 aaPredicted RBP8.94□□□□□ -0.98
CPNE3-209ENST00000620393 GJA9P57773 515 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 DPYDQ12882 1025 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 CUL4BQ13620 913 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 DGKDQ16760 1214 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 BRDTQ58F21 947 aaPredicted RBP8.94□□□□□ -0.98
CPNE3-209ENST00000620393 ARSHQ5FYA8 562 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 NT5DC1Q5TFE4 455 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 RINT1Q6NUQ1 792 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 C1orf186Q6ZWK4 172 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 ANO5Q75V66 913 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 TLK2Q86UE8 772 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 ERCC4Q92889 916 aaPredicted RBP8.94□□□□□ -0.98
CPNE3-209ENST00000620393 GLG1Q92896 1179 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 C16orf70Q9BSU1 422 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 TRIM9Q9C026 710 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 BLZF1Q9H2G9 400 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 TUBE1Q9UJT0 475 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 EMSYQ7Z589 1322 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 IGSF9BQ9UPX0 1349 aa8.94□□□□□ -0.98
CPNE3-209ENST00000620393 LCTP09848 1927 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 DOCK3Q8IZD9 2030 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 PVALEFA0A1B0GWK0 134 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 SYCE3A1L190 88 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 ARHGEF35A5YM69 484 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 KPNA6O60684 536 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 OATP04181 439 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 INHAP05111 366 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 LGALS2P05162 132 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 MMP3P08254 477 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 RARBP10826 455 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 CASP1P29466 404 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 RARRES1P49788 294 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 CPT1AP50416 773 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 LBX1P52954 281 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 NPEPPSP55786 919 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 ZNF445P59923 1031 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 PRKCEQ02156 737 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 PLCB4Q15147 1175 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 FSCN1Q16658 493 aaKnown RBP8.93□□□□□ -0.98
CPNE3-209ENST00000620393 XKR9Q5GH70 373 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 PADI6Q6TGC4 694 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 TRMT1LQ7Z2T5 733 aaKnown RBP8.93□□□□□ -0.98
CPNE3-209ENST00000620393 GPBP1Q86WP2 473 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 ATP8B4Q8TF62 1192 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 BBXQ8WY36 941 aaPredicted RBP8.93□□□□□ -0.98
CPNE3-209ENST00000620393 DDX12PQ92771 950 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 SMARCE1Q969G3 411 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 LENG1Q96BZ8 264 aaPredicted RBP8.93□□□□□ -0.98
CPNE3-209ENST00000620393 DNAJC19Q96DA6 116 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 FAM167AQ96KS9 214 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 CEP170P1Q96L14 293 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 GSDMAQ96QA5 445 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 UPF3AQ9H1J1 476 aaKnown RBP8.93□□□□□ -0.98
CPNE3-209ENST00000620393 SPC25Q9HBM1 224 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 HMX1Q9NP08 348 aaPredicted RBP8.93□□□□□ -0.98
CPNE3-209ENST00000620393 ERAP1Q9NZ08 941 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 KCND2Q9NZV8 630 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 DDX20Q9UHI6 824 aaKnown RBP8.93□□□□□ -0.98
CPNE3-209ENST00000620393 MYH15Q9Y2K3 1946 aa8.93□□□□□ -0.98
CPNE3-209ENST00000620393 PLXNB2O15031 1838 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 RBBP6Q7Z6E9 1792 aaKnown RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 TMEM150BA6NC51 233 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 H3BRB1 525 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 KLRC4O43908 158 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 ZEB2O60315 1214 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 HBP1O60381 514 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 MSCO60682 206 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 RPN1P04843 607 aaKnown RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 HSPA1AP0DMV8 641 aaKnown RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 HSPA1BP0DMV9 641 aaKnown RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 HOXB1P14653 301 aaPredicted RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 GUCY2CP25092 1073 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 GIT2Q14161 759 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 KCNB1Q14721 858 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 TARBP2Q15633 366 aaKnown RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 PKN2Q16513 984 aaKnown RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 GNASQ5JWF2 1037 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 SASS6Q6UVJ0 657 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 UNC13DQ70J99 1090 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 DYMQ7RTS9 669 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 CTU1Q7Z7A3 348 aaKnown RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 TRIML1Q8N9V2 468 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 KLHDC9Q8NEP7 349 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 CCDC47Q96A33 483 aaKnown RBP8.92□□□□□ -0.98
CPNE3-209ENST00000620393 CEP89Q96ST8 783 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 FUCA2Q9BTY2 467 aa8.92□□□□□ -0.98
CPNE3-209ENST00000620393 RUSC1Q9BVN2 902 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms