RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PCDHA6Q9UN73 950 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 PCDHA8Q9Y5H6 950 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 PCDHA13Q9Y5I0 950 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 LAMB1P07942 1786 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 GUCY2FP51841 1108 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 KIF11P52732 1056 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 GUCY2DQ02846 1103 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 TMEM266Q2M3C6 531 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 CCDC174Q6PII3 467 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 HOOK2Q96ED9 719 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 UCN2Q96RP3 112 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 LRRC1Q9BTT6 524 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 ZMYND12Q9H0C1 365 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 AGPAT5Q9NUQ2 364 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 TMEM260Q9NX78 707 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 TMX2Q9Y320 296 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 E7EVH7 732 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 CCNT1O60563 726 aaKnown RBP7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 SSBP05455 408 aaKnown RBP eCLIP7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 STAT2P52630 851 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 NPY5RQ15761 445 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 UBE2SQ16763 222 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 SUPT20HL1Q3ZLR7 823 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 SLC9C1Q4G0N8 1177 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 FBXO11Q86XK2 927 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 MMGT1Q8N4V1 131 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 CHURC1Q8WUH1 139 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 CUL5Q93034 780 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 OSBPL9Q96SU4 736 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 AMNQ9BXJ7 453 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 GLIS2Q9BZE0 524 aaPredicted RBP7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 LACRTQ9GZZ8 138 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 CUEDC2Q9H467 287 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 MAGEF1Q9HAY2 307 aa7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 GEMIN8Q9NWZ8 242 aaKnown RBP7.65□□□□□ -1.19
SRGAP3-213ENST00000618999 hCG_2014768A0A024R1R8 64 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 BUB1O43683 1085 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 HEXIM1O94992 359 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 EIF4A3P38919 411 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 MAPK8P45983 427 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 IFFO1Q0D2I5 559 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 KCNB1Q14721 858 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 TMEM259Q4ZIN3 620 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 EAPPQ56P03 285 aaPredicted RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 GMCL1P1Q8NEA9 526 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 ZKSCAN4Q969J2 545 aaPredicted RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 GMCL1Q96IK5 515 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 CEP89Q96ST8 783 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 VCPKMTQ9H867 229 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 MLXIPQ9HAP2 919 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 DDX60LQ5H9U9 1706 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 hCG_1984214I3L0E3 225 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 RNF225M0QZC1 329 aaPredicted RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 C1QBPQ07021 282 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 SPP2Q13103 211 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 GLE1Q53GS7 698 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 FBXW10Q5XX13 1052 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 PDXDC2PQ6P474 469 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 NFRKBQ6P4R8 1299 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 SV2BQ7L1I2 683 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 KRT26Q7Z3Y9 468 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 SUGP1Q8IWZ8 645 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 ZNF713Q8N859 430 aaPredicted RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 TBCKQ8TEA7 893 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 SMCR8Q8TEV9 937 aaPredicted RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 EPB41L5Q9HCM4 733 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 RNF14Q9UBS8 474 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 NOVA2Q9UNW9 492 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 TMCO5BA8MYB1 307 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L15C9J2P7 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L13C9JLJ4 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L11C9JVI0 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L18D6R9N7 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L22D6RA61 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L17D6RBQ6 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L19D6RCP7 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L20D6RJB6 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 GCOM1H8Y6P7 765 aaPredicted RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 WNT7AO00755 349 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 PRPF6O94906 941 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 MYZAPP0CAP1 466 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 SKIP12755 728 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 NR1D1P20393 614 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 RNASE9P60153 205 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 ARID5AQ03989 594 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L24Q0WX57 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 CEP85LQ5SZL2 805 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 USP17L6PQ6QN14 398 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 NEK8Q86SG6 692 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 CEP57Q86XR8 500 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 TEPSINQ96N21 525 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 LRRC27Q9C0I9 530 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 ADARB2Q9NS39 739 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 GABBR1Q9UBS5 961 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 PRR12Q9ULL5 1215 aa7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 REXO2Q9Y3B8 237 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-213ENST00000618999 DLEC1Q9Y238 1755 aa7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 CTNND1O60716 968 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 HIRAP54198 1017 aaPredicted RBP7.63□□□□□ -1.19
SRGAP3-213ENST00000618999 IFI16Q16666 785 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms