RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ANKRD7Q92527 254 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 EFHD2Q96C19 240 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-208ENST00000618395 WWP1Q9H0M0 922 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 RGS12O14924 1447 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 ENO1P06733 434 aaKnown RBP16.03■□□□□ 0.16
COL5A1-208ENST00000618395 AKR1D1P51857 326 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 ME3Q16798 604 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 EPRSP07814 1512 aaKnown RBP16.03■□□□□ 0.16
COL5A1-208ENST00000618395 ATP1A4Q13733 1029 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 LVRNQ6Q4G3 990 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 RFX6Q8HWS3 928 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 INPP5DQ92835 1189 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 MAGEF1Q9HAY2 307 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 USE1Q9NZ43 259 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 KCNG1Q9UIX4 513 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 PITPNM2Q9BZ72 1349 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 AKAP10O43572 662 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 NLRP4Q96MN2 994 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL5A1-208ENST00000618395 FAM153AQ9UHL3 310 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 ATP11CQ8NB49 1132 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 PPHLN1Q8NEY8 458 aaKnown RBP16.02■□□□□ 0.16
COL5A1-208ENST00000618395 CAAP1Q9H8G2 361 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 ADGRA3Q8IWK6 1321 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 ASAP2O43150 1006 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 HMOX2P30519 316 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 KRT25Q7Z3Z0 450 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 NOP9Q86U38 636 aaKnown RBP16.02■□□□□ 0.16
COL5A1-208ENST00000618395 GALNT4Q8N4A0 578 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 CFTRP13569 1480 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 GOLGA8JA6NMD2 632 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 GOLGA8TH3BQL2 631 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 NR5A1Q13285 461 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 RCN1Q15293 331 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 TRIM69Q86WT6 500 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 SUGP1Q8IWZ8 645 aaKnown RBP16.02■□□□□ 0.16
COL5A1-208ENST00000618395 TM6SF1Q9BZW5 370 aa16.02■□□□□ 0.16
COL5A1-208ENST00000618395 SGSM2O43147 1006 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 THOC5Q13769 683 aaKnown RBP16.02■□□□□ 0.15
COL5A1-208ENST00000618395 R3HDM1Q15032 1099 aaKnown RBP16.02■□□□□ 0.15
COL5A1-208ENST00000618395 KLHL38Q2WGJ6 581 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 DPCR1Q3MIW9 517 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 CYP2J2P51589 502 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 RSBN1Q5VWQ0 802 aaPredicted RBP16.02■□□□□ 0.15
COL5A1-208ENST00000618395 PPP1R2P3Q6NXS1 205 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 MRPL50Q8N5N7 158 aaKnown RBP16.02■□□□□ 0.15
COL5A1-208ENST00000618395 MIGA1Q8NAN2 632 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 DHX38Q92620 1227 aaKnown RBP16.02■□□□□ 0.15
COL5A1-208ENST00000618395 THTPAQ9BU02 230 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 DAPK2Q9UIK4 370 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 PCDHGA3Q9Y5H0 932 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 TOM1O60784 492 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 BPIFB4P59827 614 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 C16orf89Q6UX73 402 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 DENND6AQ8IWF6 608 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 EURLQ9NYK6 297 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 SENP1Q9P0U3 644 aa16.02■□□□□ 0.15
COL5A1-208ENST00000618395 FAM170AA1A519 330 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 TUBA4AP68366 448 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 KRT40Q6A162 431 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 KCNK16Q96T55 309 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 TEX13AQ9BXU3 409 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-208ENST00000618395 DISC1Q9NRI5 854 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 PANK4Q9NVE7 773 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 WDR70Q9NW82 654 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 PIK3R2O00459 728 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 MTRF1O75570 445 aaKnown RBP16.01■□□□□ 0.15
COL5A1-208ENST00000618395 FAM107AO95990 144 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 C6orf229H3BNL8 230 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 FOXD4Q12950 439 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-208ENST00000618395 HABP4Q5JVS0 413 aaKnown RBP16.01■□□□□ 0.15
COL5A1-208ENST00000618395 C19orf18Q8NEA5 215 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 CFAP99D6REC4 459 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 IGF2BP3O00425 579 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL5A1-208ENST00000618395 LRPAP1P30533 357 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 GOLPH3LQ9H4A5 285 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 TMEM51Q9NW97 253 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 PCDHA7Q9UN72 937 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 GSPT2Q8IYD1 628 aaKnown RBP16.01■□□□□ 0.15
COL5A1-208ENST00000618395 CHAMP1Q96JM3 812 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 VCPKMTQ9H867 229 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 RWDD2AQ9UIY3 292 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 FGD5Q6ZNL6 1462 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 KRT19P08727 400 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 ARPC4P59998 168 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 PKP1Q13835 747 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 TRIM45Q9H8W5 580 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-208ENST00000618395 MCM9Q9NXL9 1143 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 FGGP02679 453 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 S100A1P23297 94 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 TRIP4Q15650 581 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-208ENST00000618395 CCDC127Q96BQ5 260 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 LZTS2Q9BRK4 669 aa16.01■□□□□ 0.15
COL5A1-208ENST00000618395 FAM95CA0A1B0GW59 222 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 A0A1W2PQ27 194 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 A0A1W2PQ64 194 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 A0A1W2PQD8 194 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 OATP04181 439 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 PLCG2P16885 1265 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 GLMNQ92990 594 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms