RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 TBCCQ15814 346 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 MYCBPAPQ8TBZ2 947 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 CCDC17Q96LX7 622 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 CCSER1Q9C0I3 900 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 WWP1Q9H0M0 922 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 GGA1Q9UJY5 639 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 PDS5AQ29RF7 1337 aaKnown RBP11.01□□□□□ -0.65
CUL4A-212ENST00000617546 ESRRBO95718 433 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 ADORA1P30542 326 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 VHLP40337 213 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 COPS2P61201 443 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 DMP1Q13316 513 aaPredicted RBP11.01□□□□□ -0.65
CUL4A-212ENST00000617546 ADSSL1Q8N142 457 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 CEP70Q8NHQ1 597 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 TGFBRAP1Q8WUH2 860 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 TRIM56Q9BRZ2 755 aaKnown RBP11.01□□□□□ -0.65
CUL4A-212ENST00000617546 TBK1Q9UHD2 729 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 SATB2Q9UPW6 733 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 STAT2P52630 851 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 KIAA1755Q5JYT7 1200 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 ODR4Q5SWX8 454 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 DPH6Q7L8W6 267 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 FRMD5Q7Z6J6 570 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 RAD54LQ92698 747 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 GJA10Q969M2 543 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 TNNC2P02585 160 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 NAALADL2Q58DX5 795 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 SDR42E1Q8WUS8 393 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 TRAF3IP3Q9Y228 551 aa11.01□□□□□ -0.65
CUL4A-212ENST00000617546 H7C0C1 242 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 CDH16O75309 829 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 SNUPNO95149 360 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 POLR2MP0CAP2 368 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 ITIH2P19823 946 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 MARK3P27448 753 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 PHKA1P46020 1223 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 ATP5OP48047 213 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 MRPS25P82663 173 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 TMEM154Q6P9G4 183 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 RSBN1LQ6PCB5 846 aaPredicted RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 ZNF354CQ86Y25 554 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 RFX6Q8HWS3 928 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 NSMCE1Q8WV22 266 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 MAML1Q92585 1016 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 RNPC3Q96LT9 517 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 AIFM3Q96NN9 605 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 PPARGC1AQ9UBK2 798 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 IPO11Q9UI26 975 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 H0Y3Z8 333 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 SMAPO00193 183 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 MED7O43513 233 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 PHF2O75151 1096 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 RHOBTB3O94955 611 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 LIG4P49917 911 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 SKOR1P84550 965 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 PTPROQ16827 1216 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 FIGNQ5HY92 759 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 FBXO11Q86XK2 927 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 KCNV2Q8TDN2 545 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 DYDC2Q96IM9 177 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 CCDC138Q96M89 665 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 SAYSD1Q9NPB0 183 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 ZNF277Q9NRM2 450 aaPredicted RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 E9PCH4 1651 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 A0A0G2JND7 137 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 TRPA1O75762 1119 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 HDAC4P56524 1084 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 MED21Q13503 144 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 BZW1Q7L1Q6 419 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 TRIM50Q86XT4 487 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 EIF1ADQ8N9N8 165 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 PPWD1Q96BP3 646 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 SCYL1Q96KG9 808 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 PNKPQ96T60 521 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 GCOM2Q9BZD3 368 aaPredicted RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 XAB2Q9HCS7 855 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 ABCC3O15438 1527 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 ANKARQ7Z5J8 1434 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 MAP2K7O14733 419 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 PFDN6O15212 129 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 SLC16A3O15427 465 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 SRGAP2BP0DMP2 458 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 PRPSAP1Q14558 356 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 SPDYCQ5MJ68 293 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 C16orf87Q6PH81 154 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 RDH13Q8NBN7 331 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 PARVGQ9HBI0 331 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 ANKFY1Q9P2R3 1169 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 KIF28PB7ZC32 967 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 KCNA3P22001 575 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 BTNL9Q6UXG8 535 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 RAB44Q7Z6P3 723 aaPredicted RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 DEPTORQ8TB45 409 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 DNAJC7Q99615 494 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 PRMT1Q99873 361 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 DDX47Q9H0S4 455 aaKnown RBP11□□□□□ -0.65
CUL4A-212ENST00000617546 BAG5Q9UL15 447 aa11□□□□□ -0.65
CUL4A-212ENST00000617546 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
CUL4A-212ENST00000617546 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms