RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 GTPBP10A4D1E9 387 aaKnown RBP16.94■□□□□ 0.3
GPN1-212ENST00000616939 DCDC2CA8MYV0 355 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 CTNND1O60716 968 aaKnown RBP16.94■□□□□ 0.3
GPN1-212ENST00000616939 AGTP01019 485 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 FERP16591 822 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 ADAM9Q13443 819 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 ECM1Q16610 540 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 FMNL3Q8IVF7 1028 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 CCDC63Q8NA47 563 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 WDR66Q8TBY9 1149 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 SH3RF3Q8TEJ3 882 aaPredicted RBP16.94■□□□□ 0.3
GPN1-212ENST00000616939 TBC1D22AQ8WUA7 517 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 CELF1Q92879 486 aaKnown RBP16.94■□□□□ 0.3
GPN1-212ENST00000616939 PABPC3Q9H361 631 aaKnown RBP16.94■□□□□ 0.3
GPN1-212ENST00000616939 EMILIN3Q9NT22 766 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 CNOT7Q9UIV1 285 aaKnown RBP16.94■□□□□ 0.3
GPN1-212ENST00000616939 AFF2P51816 1311 aa16.94■□□□□ 0.3
GPN1-212ENST00000616939 SLC16A3O15427 465 aaKnown RBP16.93■□□□□ 0.3
GPN1-212ENST00000616939 ALADP13716 330 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 EPHA7Q15375 998 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 NEK9Q8TD19 979 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 EYA3Q99504 573 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 CARD9Q9H257 536 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 DAAM1Q9Y4D1 1078 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 DDX3YO15523 660 aaKnown RBP16.93■□□□□ 0.3
GPN1-212ENST00000616939 CAND2O75155 1236 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 RTN2O75298 545 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 LDHCP07864 332 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 MMEP08473 750 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 CHN1P15882 459 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 HSPA6P17066 643 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 PON1P27169 355 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 CLK2P49760 499 aaKnown RBP16.93■□□□□ 0.3
GPN1-212ENST00000616939 CLNS1AP54105 237 aaKnown RBP16.93■□□□□ 0.3
GPN1-212ENST00000616939 ADCY2Q08462 1091 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 EXOC3L4Q17RC7 722 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 ASPRV1Q53RT3 343 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 HAS1Q92839 578 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 RSRC1Q96IZ7 334 aaKnown RBP16.93■□□□□ 0.3
GPN1-212ENST00000616939 ERP44Q9BS26 406 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 FGFBP2Q9BYJ0 223 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 STMN4Q9H169 189 aaPredicted RBP16.93■□□□□ 0.3
GPN1-212ENST00000616939 ADAM7Q9H2U9 754 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 METTL14Q9HCE5 456 aaKnown RBP16.93■□□□□ 0.3
GPN1-212ENST00000616939 SIX2Q9NPC8 291 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 ARMCX3Q9UH62 379 aaPredicted RBP16.93■□□□□ 0.3
GPN1-212ENST00000616939 PNMA2Q9UL42 364 aa16.93■□□□□ 0.3
GPN1-212ENST00000616939 GOLGA6L10A0A0M3HER8 536 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 OPLAHO14841 1288 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
GPN1-212ENST00000616939 LDHBP07195 334 aaKnown RBP16.92■□□□□ 0.3
GPN1-212ENST00000616939 TMEM253P0C7T8 217 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 PLA2G4BP0C869 781 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 SCP2P22307 547 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 CDK8P49336 464 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 RPS8P62241 208 aaKnown RBP16.92■□□□□ 0.3
GPN1-212ENST00000616939 PPATQ06203 517 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 KLRC3Q07444 240 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 TNFAIP8L3Q5GJ75 292 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 C6orf118Q5T5N4 469 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 USP17L2Q6R6M4 530 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 SLC44A5Q8NCS7 719 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 RBM46Q8TBY0 533 aaKnown RBP16.92■□□□□ 0.3
GPN1-212ENST00000616939 MOV10L1Q9BXT6 1211 aaKnown RBP16.92■□□□□ 0.3
GPN1-212ENST00000616939 CPVLQ9H3G5 476 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 SAMD15Q9P1V8 674 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 RASAL2Q9UJF2 1139 aa16.92■□□□□ 0.3
GPN1-212ENST00000616939 DDX3XO00571 662 aaKnown RBP eCLIP16.91■□□□□ 0.31e-8■■■□□ 16.8
GPN1-212ENST00000616939 CYP11B2P19099 503 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 SLC9A1P19634 815 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 NR2F2P24468 414 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 PMS2P54278 862 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 ZNF268Q14587 947 aaPredicted RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 DENND2CQ68D51 928 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 HIBCHQ6NVY1 386 aaPredicted RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 PAXIP1Q6ZW49 1069 aaPredicted RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 GPBP1Q86WP2 473 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 NELFCDQ8IXH7 590 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 SLC30A5Q8TAD4 765 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 RFFLQ8WZ73 363 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 DPH5Q9H2P9 285 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 GOLPH3Q9H4A6 298 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 KCNMB3Q9NPA1 279 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 DDX25Q9UHL0 483 aaKnown RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 CCDC189A1A4V9 331 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 PDXKO00764 312 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 CALUO43852 315 aaPredicted RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 OAS1P00973 400 aaKnown RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 ACTN1P12814 892 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 LMNB1P20700 586 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 DR1Q01658 176 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 LMNB2Q03252 620 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 PPP1R7Q15435 360 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 ENOX2Q16206 610 aaKnown RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 BMT2Q1RMZ1 405 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 HERC4Q5GLZ8 1057 aaPredicted RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 EPM2AIP1Q7L775 607 aaPredicted RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 DAAM2Q86T65 1068 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 OLIG1Q8TAK6 271 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms