RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PCDHAC2Q9Y5I4 1007 aa14.33□□□□□ -0.12
PPP4R3B-206ENST00000616407 PGRMC1O00264 195 aaKnown RBP14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 NDUFAB1O14561 156 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 ATP2A1O14983 1001 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 CTNNA1P35221 906 aaKnown RBP14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 HMGCS2P54868 508 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 KCTD2Q14681 263 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 RUFY4Q6ZNE9 571 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 DEFB132Q7Z7B7 95 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 CPLX4Q7Z7G2 160 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 NSUN6Q8TEA1 469 aaKnown RBP14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 CNOT7Q9UIV1 285 aaKnown RBP14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 PIK3CAP42336 1068 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 IGBP1P78318 339 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 KRT76Q01546 638 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 ZC2HC1CQ53FD0 456 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 SLC51AQ86UW1 340 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 AGTPBP1Q9UPW5 1226 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 PPP2R5AQ15172 486 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 CENPPQ6IPU0 288 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 ZNF653Q96CK0 615 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 STMN4Q9H169 189 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 GABBR1Q9UBS5 961 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 DRAP1Q14919 205 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 CLUL1Q15846 466 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 FAM160B1Q5W0V3 765 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 TNFRSF25Q93038 417 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 OSBPL9Q96SU4 736 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 AP1M1Q9BXS5 423 aa14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 PACSIN2Q9UNF0 486 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3B-206ENST00000616407 NEBLO76041 1014 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 NSFP46459 744 aaKnown RBP14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 RNF10Q8N5U6 811 aaKnown RBP14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 VTI1AQ96AJ9 217 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 PNMA5Q96PV4 448 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 KCNK9Q9NPC2 374 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 INTS13Q9NVM9 706 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 ZNF185O15231 689 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 PLEKP08567 350 aaPredicted RBP14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 SLC9A1P19634 815 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 EPHB4P54760 987 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 EDRF1Q3B7T1 1238 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 SWSAP1Q6NVH7 229 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 FAM204AQ9H8W3 233 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 PITPNM2Q9BZ72 1349 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 K7ERI5 159 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 WDR46O15213 610 aaKnown RBP14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 VPS41P49754 854 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 ATP1A2P50993 1020 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 GYS2P54840 703 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 TBX2Q13207 712 aaPredicted RBP14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 ZSCAN26Q16670 478 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 SAMD7Q7Z3H4 446 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 KSR1Q8IVT5 923 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 KIAA0895Q8NCT3 520 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 MYOZ2Q9NPC6 264 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 HOXC10Q9NYD6 342 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 IKBKGQ9Y6K9 419 aa14.31□□□□□ -0.12
PPP4R3B-206ENST00000616407 DENND3A2RUS2 1198 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 PSMC5P62195 406 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 BAATQ14032 418 aaPredicted RBP14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 SLC30A10Q6XR72 485 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 HAUS6Q7Z4H7 955 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 AMIGO3Q86WK7 504 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 SYT2Q8N9I0 419 aaPredicted RBP14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 MMS19Q96T76 1030 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 RSPH10B2B2RC85 870 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 KIF4AO95239 1232 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 TMEM191BP0C7N4 346 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 RSPH10BP0C881 870 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 PPP2R5EQ16537 467 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 LPAR1Q92633 364 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 MAGOHBQ96A72 148 aaKnown RBP14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 PBKQ96KB5 322 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 INO80B-WBP1J3KQ70 363 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 MYO1FO00160 1098 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 VAMP7P51809 220 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 MTMR3Q13615 1198 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 PHLDB2Q86SQ0 1253 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 GLYCTKQ8IVS8 523 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 GSPT2Q8IYD1 628 aaKnown RBP14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 CYP2W1Q8TAV3 490 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 IDI2Q9BXS1 227 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 INO80BQ9C086 356 aaPredicted RBP14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 PCDHB4Q9Y5E5 795 aa14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 COL14A1Q05707 1796 aaKnown RBP14.3□□□□□ -0.12
PPP4R3B-206ENST00000616407 PLSCR1O15162 318 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 SREBF1P36956 1147 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 CAP2P40123 477 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 VSNL1P62760 191 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 PAF1Q8N7H5 531 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 SAAL1Q96ER3 474 aa14.29□□□□□ -0.12
PPP4R3B-206ENST00000616407 BLOC1S4Q9NUP1 217 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms