RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	GGCX	P38435	758 aa		15.21	■□□□□ 0.03
CACNA1C-231	ENST00000616390	SLC18A3	Q16572	532 aa		15.21	■□□□□ 0.03
CACNA1C-231	ENST00000616390	RINT1	Q6NUQ1	792 aa		15.21	■□□□□ 0.03
CACNA1C-231	ENST00000616390	MOXD1	Q6UVY6	613 aa		15.21	■□□□□ 0.03
CACNA1C-231	ENST00000616390	PROCA1	Q8NCQ7	364 aa	Predicted RBP	15.21	■□□□□ 0.03
CACNA1C-231	ENST00000616390	TMEM39B	Q9GZU3	492 aa		15.21	■□□□□ 0.03
CACNA1C-231	ENST00000616390	ESYT3	A0FGR9	886 aa		15.21	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TULP2	O00295	520 aa		15.21	■□□□□ 0.02
CACNA1C-231	ENST00000616390	UCHL3	P15374	230 aa		15.21	■□□□□ 0.02
CACNA1C-231	ENST00000616390	MCM3	P25205	808 aa		15.21	■□□□□ 0.02
CACNA1C-231	ENST00000616390	EDRF1	Q3B7T1	1238 aa		15.21	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TXLNB	Q8N3L3	684 aa		15.21	■□□□□ 0.02
CACNA1C-231	ENST00000616390	MRI	Q9BWK5	157 aa		15.21	■□□□□ 0.02
CACNA1C-231	ENST00000616390	EDEM3	Q9BZQ6	932 aa		15.21	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GAN	Q9H2C0	597 aa		15.21	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TMCO5B	A8MYB1	307 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TBX3	O15119	743 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PLSCR1	O15162	318 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PJA2	O43164	708 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GAS7	O60861	476 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SLITRK3	O94933	977 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PON1	P27169	355 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CYP2J2	P51589	502 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ZNF571	Q7Z3V5	609 aa	Predicted RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GCNT4	Q9P109	453 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	AJAP1	Q9UKB5	411 aa	Predicted RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ZBTB21	Q9ULJ3	1066 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ASTN1	O14525	1302 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TARSL2	A2RTX5	802 aa	Known RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GCOM1	H8Y6P7	765 aa	Predicted RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	POLR2M	P0CAP2	368 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	AR	P10275	920 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	DLGAP5	Q15398	846 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	C8orf74	Q6P047	294 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	FLAD1	Q8NFF5	587 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	IFT81	Q8WYA0	676 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CNKSR1	Q969H4	720 aa		15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PDGFD	Q9GZP0	370 aa	Predicted RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	NUCKS1	Q9H1E3	243 aa	Known RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	LUC7L	Q9NQ29	371 aa	Known RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ZNF277	Q9NRM2	450 aa	Predicted RBP	15.2	■□□□□ 0.02
CACNA1C-231	ENST00000616390	IGLV3-22	A0A075B6J6	115 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ENTPD3	O75355	529 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	EYA4	O95677	639 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SYF2	O95926	243 aa	Known RBP	15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	EPB41	P11171	864 aa	Known RBP	15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	STYK1	Q6J9G0	422 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PPP4R3CP	Q6ZMV5	832 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	OTOP1	Q7RTM1	612 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	RBM46	Q8TBY0	533 aa	Known RBP	15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	EXOC4	Q96A65	974 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	NCAPG	Q9BPX3	1015 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TRAF3IP3	Q9Y228	551 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	MARS	P56192	900 aa	Known RBP	15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	NAB2	Q15742	525 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ZSCAN26	Q16670	478 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	FRMD5	Q7Z6J6	570 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	FAM71B	Q8TC56	605 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	HOMER2	Q9NSB8	354 aa		15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TYW1	Q9NV66	732 aa	Known RBP	15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	WRAP73	Q9P2S5	460 aa	Predicted RBP	15.19	■□□□□ 0.02
CACNA1C-231	ENST00000616390	PDXK	O00764	312 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GFPT2	O94808	682 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CFAP221	Q4G0U5	840 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CPXCR1	Q8N123	301 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	LARGE2	Q8N3Y3	721 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	OGFOD1	Q8N543	542 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GOLGA6L1	Q8N7Z2	621 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ZNF577	Q9BSK1	485 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GOPC	Q9HD26	462 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	ZNF70	Q9UC06	446 aa	Predicted RBP	15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	RPL13	P26373	211 aa	Known RBP	15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CIITA	P33076	1130 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	DGKZ	Q13574	1117 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	EPM2AIP1	Q7L775	607 aa	Predicted RBP	15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	IRF2BP2	Q7Z5L9	587 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	MMGT1	Q8N4V1	131 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	AIPL1	Q9NZN9	384 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	CALCOCO1	Q9P1Z2	691 aa		15.18	■□□□□ 0.02
CACNA1C-231	ENST00000616390	MYH11	P35749	1972 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SPDYE2B	A6NHP3	402 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SPDYE6	P0CI01	402 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TRIM49	P0CI25	452 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TRIM49C	P0CI26	452 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	GBP6	Q6ZN66	633 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	KLHL7	Q8IXQ5	586 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	RNF10	Q8N5U6	811 aa	Known RBP	15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SYN2	Q92777	582 aa	Predicted RBP	15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	AGBL1	Q96MI9	1066 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	KRT12	Q99456	494 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	HSD17B14	Q9BPX1	270 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	SEPT11	Q9NVA2	429 aa	Known RBP	15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	C10orf71	Q711Q0	1435 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	RBAK-RBAKDN	I3L0D1	243 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	KCNK3	O14649	394 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	TGFB1I1	O43294	461 aa		15.17	■□□□□ 0.02
CACNA1C-231	ENST00000616390	FKBP1A	P62942	108 aa	Known RBP	15.17	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms