RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 GATMP50440 423 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 NFX1Q12986 1120 aaKnown RBP23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 CAMK1Q14012 370 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 CTC1Q2NKJ3 1217 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 SWSAP1Q6NVH7 229 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 KIAA0319LQ8IZA0 1049 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 REXO1Q8N1G1 1221 aaKnown RBP23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 P2RX5Q93086 422 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 ZNF577Q9BSK1 485 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 CDHR5Q9HBB8 845 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 C6orf50Q9HD87 102 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 PLAGL2Q9UPG8 496 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 FNDC1Q4ZHG4 1894 aaPredicted RBP23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 PLXNA4Q9HCM2 1894 aa23.6■■□□□ 1.37
TRAPPC3-208ENST00000616074 PRPF3O43395 683 aaKnown RBP23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 NCK2O43639 380 aa23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 GTF2F1P35269 517 aaKnown RBP eCLIP23.59■■□□□ 1.373e-41■■■■■ 39
TRAPPC3-208ENST00000616074 PLA2G5P39877 138 aa23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 SETQ01105 290 aaPredicted RBP23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 ZNF484Q5JVG2 852 aa23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 BLOC1S2Q6QNY1 142 aa23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 CCDC12Q8WUD4 166 aaPredicted RBP23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 TMEM40Q8WWA1 233 aa23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 PHKBQ93100 1093 aa23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 ERVK-5Q9HDB9 667 aa23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 NOC2LQ9Y3T9 749 aaKnown RBP23.59■■□□□ 1.37
TRAPPC3-208ENST00000616074 MGEA5O60502 916 aa23.58■■□□□ 1.37
TRAPPC3-208ENST00000616074 ITGB1P05556 798 aa23.58■■□□□ 1.37
TRAPPC3-208ENST00000616074 IBSPP21815 317 aaPredicted RBP23.58■■□□□ 1.37
TRAPPC3-208ENST00000616074 DNAJB1P25685 340 aa23.58■■□□□ 1.37
TRAPPC3-208ENST00000616074 DLX2Q07687 328 aaPredicted RBP23.58■■□□□ 1.37
TRAPPC3-208ENST00000616074 RASGRP4Q8TDF6 673 aa23.58■■□□□ 1.37
TRAPPC3-208ENST00000616074 TBC1D22BQ9NU19 505 aa23.58■■□□□ 1.37
TRAPPC3-208ENST00000616074 LRFN2Q9ULH4 789 aa23.58■■□□□ 1.37
TRAPPC3-208ENST00000616074 FAM50BQ9Y247 325 aa23.58■■□□□ 1.37
TRAPPC3-208ENST00000616074 PPFIA3O75145 1194 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 RPS6KA5O75582 802 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 C22orf31O95567 290 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 SARSP49591 514 aaKnown RBP23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 CLUL1Q15846 466 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 NAALADL2Q58DX5 795 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 MCTP2Q6DN12 878 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 ZNF746Q6NUN9 644 aaPredicted RBP23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 CKAP2LQ8IYA6 745 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 KLHL23Q8NBE8 558 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 FAM122AQ96E09 287 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 PPP1R16BQ96T49 567 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 IGFLR1Q9H665 355 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 HCN4Q9Y3Q4 1203 aa23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 MAFBQ9Y5Q3 323 aaPredicted RBP23.57■■□□□ 1.36
TRAPPC3-208ENST00000616074 TBX10O75333 385 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 RPS6KB1P23443 525 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 GNA11P29992 359 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 ZP2Q05996 745 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 NTRK3Q16288 839 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 PRR16Q569H4 304 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 TRMT1LQ7Z2T5 733 aaKnown RBP23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 SMAP1Q8IYB5 467 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 FBXL16Q8N461 479 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 SPPL3Q8TCT6 385 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 BBXQ8WY36 941 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 AGXT2Q9BYV1 514 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 ST3GAL5Q9UNP4 418 aa23.56■■□□□ 1.36
TRAPPC3-208ENST00000616074 LINC01565O15544 149 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 IRS1P35568 1242 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 KIZQ2M2Z5 673 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 LENG9Q96B70 501 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 OSMRQ99650 979 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 ADAM2Q99965 735 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 RGS18Q9NS28 235 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 GABBR1Q9UBS5 961 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 PRKAG3Q9UGI9 489 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 PCDHB7Q9Y5E2 793 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 PCDHA10Q9Y5I2 948 aa23.55■■□□□ 1.36
TRAPPC3-208ENST00000616074 DENND3A2RUS2 1198 aa23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 MBTPS2O43462 519 aa23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 PSAPP07602 524 aa23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 CIITAP33076 1130 aa23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 AKAP17AQ02040 695 aaKnown RBP23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 ADGRD2Q7Z7M1 963 aa23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 POF1BQ8WVV4 589 aa23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 SLC26A6Q9BXS9 759 aa23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 RNF26Q9BY78 433 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 TCEAL9Q9UHQ7 104 aa23.54■■□□□ 1.36
TRAPPC3-208ENST00000616074 C19orf67A6NJJ6 358 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 GPR182O15218 404 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 VTNP04004 478 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 ALADP13716 330 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 CRYBB1P53674 252 aaPredicted RBP23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 SMAD2Q15796 467 aaKnown RBP23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 ODR4Q5SWX8 454 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 FAM228AQ86W67 206 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 ADHFE1Q8IWW8 467 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 METTL13Q8N6R0 699 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 CCDC148Q8NFR7 591 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 BICD2Q8TD16 824 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 C1orf112Q9NSG2 853 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 VPS54Q9P1Q0 977 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 SAMM50Q9Y512 469 aa23.53■■□□□ 1.36
TRAPPC3-208ENST00000616074 C9IYK1 514 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms