RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SNAPC2Q13487 334 aa9.65□□□□□ -0.86
VPS11-206ENST00000614944 ENOX2Q16206 610 aaKnown RBP9.65□□□□□ -0.86
VPS11-206ENST00000614944 SH3RF1Q7Z6J0 888 aa9.65□□□□□ -0.86
VPS11-206ENST00000614944 RIOX2Q8IUF8 465 aa9.65□□□□□ -0.86
VPS11-206ENST00000614944 DTNBP1Q96EV8 351 aa9.65□□□□□ -0.86
VPS11-206ENST00000614944 DACT1Q9NYF0 836 aa9.65□□□□□ -0.86
VPS11-206ENST00000614944 HOOK1Q9UJC3 728 aaKnown RBP9.65□□□□□ -0.86
VPS11-206ENST00000614944 PASKQ96RG2 1323 aa9.65□□□□□ -0.86
VPS11-206ENST00000614944 MYO1FO00160 1098 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 NR1I2O75469 434 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 FLOT1O75955 427 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 ITGBL1O95965 494 aaPredicted RBP9.64□□□□□ -0.87
VPS11-206ENST00000614944 HMGCS2P54868 508 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 ACTN3Q08043 901 aaPredicted RBP9.64□□□□□ -0.87
VPS11-206ENST00000614944 DTHD1Q6ZMT9 781 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 CCDC150Q8NCX0 1101 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 CNNM3Q8NE01 707 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 TEX13BQ9BXU2 312 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 RAB34Q9BZG1 259 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 KLC4Q9NSK0 619 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.64□□□□□ -0.87
VPS11-206ENST00000614944 CCPG1Q9ULG6 757 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 WNT7AO00755 349 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 SLC25A27O95847 323 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 NDUFA8P51970 172 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 CUL3Q13618 768 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 SKIDA1Q1XH10 827 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 FAAH2Q6GMR7 532 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 GPAT2Q6NUI2 795 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 MTHFD1LQ6UB35 978 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 CEP57L1Q8IYX8 460 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 SYCP3Q8IZU3 236 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 SPATA20Q8TB22 786 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 TANGO6Q9C0B7 1094 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 TUBE1Q9UJT0 475 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 KCNH3Q9ULD8 1083 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 SH3BP5O60239 455 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 ZNF202O95125 648 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 OSBPP22059 807 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 SYKP43405 635 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 GTF2A2P52657 109 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 ARHGAP4P98171 946 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 MDM2Q00987 491 aaPredicted RBP9.64□□□□□ -0.87
VPS11-206ENST00000614944 ZNF174Q15697 407 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 IL17AQ16552 155 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 PRAMEF18Q5VWM3 479 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 PCNX4Q63HM2 1172 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 MIS18BP1Q6P0N0 1132 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 CCDC50Q8IVM0 306 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 WNK4Q96J92 1243 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 BPIFA3Q9BQP9 254 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 CSRNP2Q9H175 543 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 RRAGCQ9HB90 399 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 GBA2Q9HCG7 927 aaPredicted RBP9.64□□□□□ -0.87
VPS11-206ENST00000614944 TMEM260Q9NX78 707 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 PFASO15067 1338 aa9.64□□□□□ -0.87
VPS11-206ENST00000614944 PDLIM1O00151 329 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 EIF3FO00303 357 aaPredicted RBP9.63□□□□□ -0.87
VPS11-206ENST00000614944 CETPP11597 493 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 NSUN2Q08J23 767 aaKnown RBP eCLIP9.63□□□□□ -0.87
VPS11-206ENST00000614944 EAPPQ56P03 285 aaPredicted RBP9.63□□□□□ -0.87
VPS11-206ENST00000614944 C2orf69Q8N8R5 385 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 ETNPPLQ8TBG4 499 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 RASGRP4Q8TDF6 673 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 RSPH1Q8WYR4 309 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 OPTNQ96CV9 577 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 CORO1BQ9BR76 489 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 BRD8Q9H0E9 1235 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 FBXO28Q9NVF7 368 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 MAGEC2Q9UBF1 373 aaPredicted RBP9.63□□□□□ -0.87
VPS11-206ENST00000614944 CCNT1O60563 726 aaKnown RBP9.63□□□□□ -0.87
VPS11-206ENST00000614944 RPSAP08865 295 aaKnown RBP9.63□□□□□ -0.87
VPS11-206ENST00000614944 MYBPC3Q14896 1274 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 FXNQ16595 210 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 LRRN4CLQ8ND94 238 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 SLC35B4Q969S0 331 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 LENG9Q96B70 501 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 TNMDQ9H2S6 317 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 SCAF8Q9UPN6 1271 aaKnown RBP9.63□□□□□ -0.87
VPS11-206ENST00000614944 ZNF510Q9Y2H8 683 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 FAN1Q9Y2M0 1017 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 THSD7BQ9C0I4 1608 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 IGLV3-22A0A075B6J6 115 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 ACTN4O43707 911 aaKnown RBP9.63□□□□□ -0.87
VPS11-206ENST00000614944 MCM7P33993 719 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 TXLNAP40222 546 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 CEBPZQ03701 1054 aaKnown RBP9.63□□□□□ -0.87
VPS11-206ENST00000614944 CALCRLQ16602 461 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 TMEM266Q2M3C6 531 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 ANKRD13BQ86YJ7 626 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 CCDC170Q8IYT3 715 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 SMYD1Q8NB12 490 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 DNERQ8NFT8 737 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 WHAMMQ8TF30 809 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 ATG4CQ96DT6 458 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 ELP3Q9H9T3 547 aa9.63□□□□□ -0.87
VPS11-206ENST00000614944 DDX25Q9UHL0 483 aaKnown RBP9.63□□□□□ -0.87
VPS11-206ENST00000614944 USP27XA6NNY8 438 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms