RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 KBTBD4Q9NVX7 518 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-212ENST00000613856 PKD2L1Q9P0L9 805 aa12.78□□□□□ -0.36
SLIRP-212ENST00000613856 POTEB3A0JP26 581 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 SYCE3A1L190 88 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 DDX39AO00148 427 aaKnown RBP12.77□□□□□ -0.37
SLIRP-212ENST00000613856 CHMP2AO43633 222 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 CCNE2O96020 404 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 MYOGP15173 224 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 PTGS1P23219 599 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 KCNQ1P51787 676 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 TTLL4Q14679 1199 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 KCNA10Q16322 511 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 CCDC62Q6P9F0 684 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 POTEBQ6S5H4 581 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 CATSPER3Q86XQ3 398 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 KLHDC9Q8NEP7 349 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 LRRC15Q8TF66 581 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 RAD54LQ92698 747 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 PAGE5Q96GU1 130 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 ABHD16BQ9H3Z7 469 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 STARD7Q9NQZ5 370 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 BLOC1S4Q9NUP1 217 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 KIAA1468Q9P260 1216 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 SLC9A2Q9UBY0 812 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 DDX41Q9UJV9 622 aaKnown RBP12.77□□□□□ -0.37
SLIRP-212ENST00000613856 UMODL1Q5DID0 1318 aa12.77□□□□□ -0.37
SLIRP-212ENST00000613856 BDP1A6H8Y1 2624 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-212ENST00000613856 LYPLA2O95372 231 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 ARIH2O95376 493 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 SNAI1O95863 264 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-212ENST00000613856 P4HBP07237 508 aaKnown RBP12.76□□□□□ -0.37
SLIRP-212ENST00000613856 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-212ENST00000613856 RABGGTBP53611 331 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 MRPS5P82675 430 aaKnown RBP12.76□□□□□ -0.37
SLIRP-212ENST00000613856 SP2Q02086 613 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 ZRSR1Q15695 479 aaKnown RBP12.76□□□□□ -0.37
SLIRP-212ENST00000613856 ECM1Q16610 540 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 NT5DC1Q5TFE4 455 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 MFSD5Q6N075 450 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 TAPT1Q6NXT6 567 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 LRSAM1Q6UWE0 723 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 METTL7BQ6UX53 244 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 EEPD1Q7L9B9 569 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 SPATA20Q8TB22 786 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 LARP4BQ92615 738 aaKnown RBP12.76□□□□□ -0.37
SLIRP-212ENST00000613856 DYDC2Q96IM9 177 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 TOX2Q96NM4 488 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 MTRQ99707 1265 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 FUCA2Q9BTY2 467 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 TUBE1Q9UJT0 475 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 PCDHA10Q9Y5I2 948 aa12.76□□□□□ -0.37
SLIRP-212ENST00000613856 DCDC2CA8MYV0 355 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 SLITRK3O94933 977 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 ATG7O95352 703 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 GGPS1O95749 300 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 BMP1P13497 986 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 AKR1A1P14550 325 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 CYP2C18P33260 490 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 ACTR2P61160 394 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 CYP4A11Q02928 519 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 DPYDQ12882 1025 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 PNOCQ13519 176 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 SCN5AQ14524 2016 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 PRRC2BQ5JSZ5 2229 aaKnown RBP12.75□□□□□ -0.37
SLIRP-212ENST00000613856 CNNM4Q6P4Q7 775 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 POTEGQ6S5H5 508 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 KCNK18Q7Z418 384 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 CKAP2LQ8IYA6 745 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 MICALL1Q8N3F8 863 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
SLIRP-212ENST00000613856 EMID1Q96A84 441 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-212ENST00000613856 PLIN2Q99541 437 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 LXNQ9BS40 222 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 LRRC27Q9C0I9 530 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 EPHX3Q9H6B9 360 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 RGL1Q9NZL6 768 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 NRBP1Q9UHY1 535 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 IGSF9BQ9UPX0 1349 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 KIAA1024Q9UPX6 916 aa12.75□□□□□ -0.37
SLIRP-212ENST00000613856 RFXAPO00287 272 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 NKRFO15226 690 aaKnown RBP eCLIP12.74□□□□□ -0.37
SLIRP-212ENST00000613856 DKC1O60832 514 aaKnown RBP eCLIP12.74□□□□□ -0.37
SLIRP-212ENST00000613856 SMC2O95347 1197 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 EYA4O95677 639 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 PSAPP07602 524 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 SUPT20HL2P0C7V6 817 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 CCDC192P0DO97 292 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 TXNP10599 105 aaKnown RBP12.74□□□□□ -0.37
SLIRP-212ENST00000613856 QARSP47897 775 aaKnown RBP12.74□□□□□ -0.37
SLIRP-212ENST00000613856 SARSP49591 514 aaKnown RBP12.74□□□□□ -0.37
SLIRP-212ENST00000613856 CDK7P50613 346 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 AMPD3Q01432 767 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 ACVR2BQ13705 512 aa12.74□□□□□ -0.37
SLIRP-212ENST00000613856 CTTNQ14247 550 aaKnown RBP12.74□□□□□ -0.37
SLIRP-212ENST00000613856 CELF3Q5SZQ8 465 aaKnown RBP12.74□□□□□ -0.37
SLIRP-212ENST00000613856 MIS18BP1Q6P0N0 1132 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms