RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 MEIS2O14770 477 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 PPP1R37O75864 691 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 FLOT1O75955 427 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 GNA14O95837 355 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 EPB41P11171 864 aaKnown RBP15.32■□□□□ 0.04
COL6A1-207ENST00000612273 ITIH3Q06033 890 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 GPATCH4Q5T3I0 446 aaKnown RBP15.32■□□□□ 0.04
COL6A1-207ENST00000612273 CCDC174Q6PII3 467 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 GBP6Q6ZN66 633 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 PALB2Q86YC2 1186 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 TBC1D22AQ8WUA7 517 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 DNAJC18Q9H819 358 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 TAS2R14Q9NYV8 317 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 TISP43B9A030 160 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 PGRMC1O00264 195 aaKnown RBP15.32■□□□□ 0.04
COL6A1-207ENST00000612273 EVI5O60447 810 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 FAM13AO94988 1023 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 SPATA31C1P0DKV0 1188 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 GYS1P13807 737 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 TPCN2Q8NHX9 752 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 ACP6Q9NPH0 428 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 AIPL1Q9NZN9 384 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 RBAK-RBAKDNI3L0D1 243 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 SNHG28P0DPA3 235 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 CLK2P49760 499 aaKnown RBP15.32■□□□□ 0.04
COL6A1-207ENST00000612273 ICA1Q05084 483 aa15.32■□□□□ 0.04
COL6A1-207ENST00000612273 ZNF473Q8WTR7 871 aaKnown RBP15.32■□□□□ 0.04
COL6A1-207ENST00000612273 F5H6K3 240 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 BUB1BO60566 1050 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 SLCO1A2P46721 670 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 USP11P51784 963 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 KLRC3Q07444 240 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 UAP1Q16222 522 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 GLE1Q53GS7 698 aaKnown RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 PPP1R9AQ9ULJ8 1098 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 SCAF8Q9UPN6 1271 aaKnown RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 RABGAP1Q9Y3P9 1069 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 COL14A1Q05707 1796 aaKnown RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 HGSO14964 777 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 MDH1P40925 334 aaKnown RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 MAGOHP61326 146 aaKnown RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 ZNF572Q7Z3I7 529 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 VPS36Q86VN1 386 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 NLRP14Q86W24 1093 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 SLC35C1Q96A29 364 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 MAGOHBQ96A72 148 aaKnown RBP15.31■□□□□ 0.04
COL6A1-207ENST00000612273 EDEM3Q9BZQ6 932 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 PCNTO95613 3336 aa15.31■□□□□ 0.04
COL6A1-207ENST00000612273 MSH4O15457 936 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 GCFC2P16383 781 aaKnown RBP15.3■□□□□ 0.04
COL6A1-207ENST00000612273 SMARCA1P28370 1054 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 PLTPP55058 493 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 DRAP1Q14919 205 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-207ENST00000612273 FAM186BQ8IYM0 893 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 ERMNQ8TAM6 284 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 TEKT1Q969V4 418 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 GAKO14976 1311 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 ABCB11O95342 1321 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 IGSF9BQ9UPX0 1349 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 PHF20L1A8MW92 1017 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-207ENST00000612273 STAT1P42224 750 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 DDR1Q08345 913 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 PTGISQ16647 500 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 FBXO11Q86XK2 927 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 MYCBPAPQ8TBZ2 947 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 HOOK2Q96ED9 719 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 KCNMB3Q9NPA1 279 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 USP21Q9UK80 565 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 DNAJC12Q9UKB3 198 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 SNX24Q9Y343 169 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 ATMINO43313 823 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-207ENST00000612273 MSL1Q68DK7 614 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 PHLDB2Q86SQ0 1253 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 CCDC25Q86WR0 208 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 SLC35G2Q8TBE7 412 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 DYDC2Q96IM9 177 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 SELENOSQ9BQE4 189 aa15.3■□□□□ 0.04
COL6A1-207ENST00000612273 EIF2AK1Q9BQI3 630 aaKnown RBP15.3■□□□□ 0.04
COL6A1-207ENST00000612273 hCG_1984214I3L0E3 225 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 CALUO43852 315 aaPredicted RBP15.29■□□□□ 0.04
COL6A1-207ENST00000612273 HNRNPH1P31943 449 aaKnown RBP15.29■□□□□ 0.04
COL6A1-207ENST00000612273 SF3B2Q13435 895 aaKnown RBP15.29■□□□□ 0.04
COL6A1-207ENST00000612273 APOBEC3HQ6NTF7 200 aaKnown RBP15.29■□□□□ 0.04
COL6A1-207ENST00000612273 ZNF713Q8N859 430 aaPredicted RBP15.29■□□□□ 0.04
COL6A1-207ENST00000612273 BANK1Q8NDB2 785 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 WHAMMQ8TF30 809 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 ARHGEF26Q96DR7 871 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL6A1-207ENST00000612273 EPN3Q9H201 632 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 RNF14Q9UBS8 474 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 PTPN22Q9Y2R2 807 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 ASTN1O14525 1302 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 GH2P01242 217 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 ZNF844Q08AG5 666 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 QPCTQ16769 361 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 CBWD6Q4V339 395 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 CBWD3Q5JTY5 395 aa15.29■□□□□ 0.04
COL6A1-207ENST00000612273 CBWD5Q5RIA9 395 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms