RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 GINS2Q9Y248 185 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 INSL6Q9Y581 213 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 BTBD18B2RXH4 712 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 GTPBP6O43824 516 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-208ENST00000612050 NEMFO60524 1076 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 CHRNA1P02708 482 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 CA3P07451 260 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 PSMC5P62195 406 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 MBTPS1Q14703 1052 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 CALCRLQ16602 461 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 XKR3Q5GH77 459 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 ETNPPLQ8TBG4 499 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 OXER1Q8TDS5 423 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 YME1L1Q96TA2 773 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 AKT3Q9Y243 479 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 MICAL3Q7RTP6 2002 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 TET1Q8NFU7 2136 aa13.86□□□□□ -0.19
CBWD3-208ENST00000612050 SLC37A4O43826 429 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 GJB5O95377 273 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 DEFB103AP81534 67 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 CDC42EP1Q00587 391 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 GUCY1B3Q02153 619 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 MGAT3Q09327 533 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 TMEM62Q0P6H9 643 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 PPP2R5CQ13362 524 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 GPNMBQ14956 572 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 GRIN2CQ14957 1233 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 NCAPH2Q6IBW4 605 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 OTUD6AQ7L8S5 288 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 VWCEQ96DN2 955 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 FOXP1Q9H334 677 aaPredicted RBP13.85□□□□□ -0.19
CBWD3-208ENST00000612050 PCDHA12Q9UN75 941 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 YBX2Q9Y2T7 364 aaKnown RBP13.85□□□□□ -0.19
CBWD3-208ENST00000612050 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.85□□□□□ -0.19
CBWD3-208ENST00000612050 WDR81Q562E7 1941 aa13.85□□□□□ -0.19
CBWD3-208ENST00000612050 KDM3AQ9Y4C1 1321 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 GPR182O15218 404 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 RPS6KA5O75582 802 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 UPP2O95045 317 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 P4HBP07237 508 aaKnown RBP13.84□□□□□ -0.19
CBWD3-208ENST00000612050 IGFBP4P22692 258 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 QARSP47897 775 aaKnown RBP13.84□□□□□ -0.19
CBWD3-208ENST00000612050 ORC2Q13416 577 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-208ENST00000612050 LPIN1Q14693 890 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 EFCAB12Q6NXP0 572 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 FAM117BQ6P1L5 589 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 MAFAQ8NHW3 353 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-208ENST00000612050 NEK9Q8TD19 979 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 KIF2CQ99661 725 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
CBWD3-208ENST00000612050 PRDM12Q9H4Q4 367 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 KCNMB3Q9NPA1 279 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 PPME1Q9Y570 386 aa13.84□□□□□ -0.19
CBWD3-208ENST00000612050 DDX11L8A8MPP1 907 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 H3BQV1 296 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 DTNBO60941 627 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 C22orf31O95567 290 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 STAG3L1P0CL83 205 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 ATP2B1P20020 1258 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 NFX1Q12986 1120 aaKnown RBP13.83□□□□□ -0.2
CBWD3-208ENST00000612050 EPHA7Q15375 998 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 MTERF2Q49AM1 385 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 SLC17A8Q8NDX2 589 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 FBXO18Q8NFZ0 1043 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 SLC7A3Q8WY07 619 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 GJA10Q969M2 543 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 TBC1D32Q96NH3 1257 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 SAMD11Q96NU1 681 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 LRFN2Q9ULH4 789 aa13.83□□□□□ -0.2
CBWD3-208ENST00000612050 EVPLQ92817 2033 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 DENND3A2RUS2 1198 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 MYOGP15173 224 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 ATP4AP20648 1035 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 CD52P31358 61 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 CRYBB1P53674 252 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-208ENST00000612050 TMEM266Q2M3C6 531 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
CBWD3-208ENST00000612050 BANK1Q8NDB2 785 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 ERMNQ8TAM6 284 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 ARNTL2Q8WYA1 636 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 TOP1MTQ969P6 601 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 TGS1Q96RS0 853 aaKnown RBP13.82□□□□□ -0.2
CBWD3-208ENST00000612050 NIFKQ9BYG3 293 aaKnown RBP13.82□□□□□ -0.2
CBWD3-208ENST00000612050 ZSWIM4Q9H7M6 989 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 TTC12Q9H892 705 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-208ENST00000612050 SMC3Q9UQE7 1217 aa13.82□□□□□ -0.2
CBWD3-208ENST00000612050 EDIL3O43854 480 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 ZNF862O60290 1169 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 ZSCAN20P17040 1043 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-208ENST00000612050 MCM7P33993 719 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 TXKP42681 527 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 CLCN3P51790 818 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 POLGP54098 1239 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-208ENST00000612050 MCTP1Q6DN14 999 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 KIAA0319LQ8IZA0 1049 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 NLRP7Q8WX94 980 aa13.81□□□□□ -0.2
CBWD3-208ENST00000612050 TNFRSF25Q93038 417 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms