RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 GOLGA6L7A0A1B0GV03 622 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 SMIM23A6NLE4 172 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 SART1O43290 800 aaKnown RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 SLC26A4O43511 780 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 ANXA13P27216 316 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 ECE1P42892 770 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 PTK2Q05397 1052 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 MAPK8IP2Q13387 824 aaPredicted RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 ALCAMQ13740 583 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 TMEM119Q4V9L6 283 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 ADAT2Q7Z6V5 191 aaKnown RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 WHAMMQ8TF30 809 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 DNAJC19Q96DA6 116 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 MTMR8Q96EF0 704 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 PSD3Q9NYI0 1048 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 SMARCAL1Q9NZC9 954 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 PACSIN2Q9UNF0 486 aaPredicted RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 TNNI1P19237 187 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 DRAP1Q14919 205 aaPredicted RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 TBC1D10BQ4KMP7 808 aaPredicted RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 CIAPIN1Q6FI81 312 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 SLC30A10Q6XR72 485 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 OTUD6AQ7L8S5 288 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 CYP2W1Q8TAV3 490 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 CEP170P1Q96L14 293 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 FBXO28Q9NVF7 368 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 ASIC3Q9UHC3 531 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 SIK3Q9Y2K2 1263 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 ZBTB12Q9Y330 459 aaPredicted RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 AKAP3O75969 853 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 KIF4AO95239 1232 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 FECHP22830 423 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 GGCXP38435 758 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 DHX9Q08211 1270 aaKnown RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 HAUS6Q7Z4H7 955 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 OTUD6BQ8N6M0 293 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 RIN2Q8WYP3 895 aaPredicted RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 RIT2Q99578 217 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 C1orf112Q9NSG2 853 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 NAGPAQ9UK23 515 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 COL1A1P02452 1464 aaPredicted RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 SLC16A3O15427 465 aaKnown RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 QARSP47897 775 aaKnown RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 PSMC6P62333 389 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 AMPD2Q01433 879 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 DACT2Q5SW24 774 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 KLHDC7AQ5VTJ3 777 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 CCDC50Q8IVM0 306 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 RHOT2Q8IXI1 618 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 SYT2Q8N9I0 419 aaPredicted RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 RMDN3Q96TC7 470 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 POLR3CQ9BUI4 534 aaPredicted RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 PLCB1Q9NQ66 1216 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 RBM12Q9NTZ6 932 aaKnown RBP6.93□□□□□ -1.3
SNX13-213ENST00000611725 EHD2Q9NZN4 543 aa6.93□□□□□ -1.3
SNX13-213ENST00000611725 H0YCG3 227 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 PRLRP16471 622 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 HSPA6P17066 643 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 NNTQ13423 1086 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 PRKG1Q13976 671 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 MIIPQ5JXC2 388 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 ARHGEF16Q5VV41 709 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 ALS2CLQ60I27 953 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 ZNF365Q70YC5 407 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 TEX2Q8IWB9 1127 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 SH2D3AQ9BRG2 576 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 TLR10Q9BXR5 811 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 TRAF3IP3Q9Y228 551 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 DAAM1Q9Y4D1 1078 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 MIF4GDA9UHW6 222 aaKnown RBP6.92□□□□□ -1.3
SNX13-213ENST00000611725 WDR64B1ANS9 1081 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 FAM86B1E9PN63 330 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 FAM86B2P0C5J1 330 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 KRT76Q01546 638 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 STRN3Q13033 797 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 MESDQ14696 234 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 SLC17A8Q8NDX2 589 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 RFFLQ8WZ73 363 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 MKL1Q969V6 931 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 CABS1Q96KC9 395 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 AP1M1Q9BXS5 423 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 TUFT1Q9NNX1 390 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 ZNF277Q9NRM2 450 aaPredicted RBP6.92□□□□□ -1.3
SNX13-213ENST00000611725 FEZ2Q9UHY8 353 aaPredicted RBP6.92□□□□□ -1.3
SNX13-213ENST00000611725 BCS1LQ9Y276 419 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 RXRBP28702 533 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 NSFP46459 744 aaKnown RBP6.92□□□□□ -1.3
SNX13-213ENST00000611725 PPARDQ03181 441 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 DMP1Q13316 513 aaPredicted RBP6.92□□□□□ -1.3
SNX13-213ENST00000611725 GIT2Q14161 759 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 CROCCP2Q86T23 111 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 MICALL1Q8N3F8 863 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 SLC7A3Q8WY07 619 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 STMN4Q9H169 189 aaPredicted RBP6.92□□□□□ -1.3
SNX13-213ENST00000611725 UBE2TQ9NPD8 197 aaPredicted RBP6.92□□□□□ -1.3
SNX13-213ENST00000611725 MAP2K7O14733 419 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 MYBP10242 640 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 MFAP3P55082 362 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 SLC20A2Q08357 652 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 SPP2Q13103 211 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms