RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 PCDHA2Q9Y5H9 948 aa9.79□□□□□ -0.84
SNCA-212ENST00000611107 TCF20Q9UGU0 1960 aaKnown RBP9.78□□□□□ -0.84
SNCA-212ENST00000611107 TMEM265A0A087WTH1 108 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 A0A087WWV3 80 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 CCDC194A0A1B0GVG4 234 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 LINC01553A4QN01 128 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 ZBTB39O15060 712 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 LPXNO60711 386 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 LINC00271P0C7V0 271 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 ACTN1P12814 892 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 FOSL2P15408 326 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 CD52P31358 61 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 MRPS6P82932 125 aaKnown RBP9.78□□□□□ -0.84
SNCA-212ENST00000611107 SETQ01105 290 aaPredicted RBP9.78□□□□□ -0.84
SNCA-212ENST00000611107 SPIRE1Q08AE8 756 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 RAB30Q15771 203 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 LRCH2Q5VUJ6 765 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 PPP2R2DQ66LE6 453 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 MIS18BP1Q6P0N0 1132 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 MAFAQ8NHW3 353 aaPredicted RBP9.78□□□□□ -0.84
SNCA-212ENST00000611107 SLC9A7Q96T83 725 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 AZI2Q9H6S1 392 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 BRMS1Q9HCU9 246 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 KCNMB3Q9NPA1 279 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 DISC1Q9NRI5 854 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 TBC1D22BQ9NU19 505 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 MSRAQ9UJ68 235 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 PCDHA10Q9Y5I2 948 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 FNDC1Q4ZHG4 1894 aaPredicted RBP9.78□□□□□ -0.84
SNCA-212ENST00000611107 VCANP13611 3396 aa9.78□□□□□ -0.84
SNCA-212ENST00000611107 ABHD14A-ACY1A0A1B0GW23 586 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 RRN3P2A6NIE6 340 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 ENPP3O14638 875 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 TLL1O43897 1013 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 HBP1O60381 514 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 GAS7O60861 476 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 GJB5O95377 273 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 VTNP04004 478 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 GNAT1P11488 350 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 GATMP50440 423 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 CLCN3P51790 818 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 PRKCEQ02156 737 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 IKBKEQ14164 716 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 TARBP2Q15633 366 aaKnown RBP9.77□□□□□ -0.85
SNCA-212ENST00000611107 CCDC85BQ15834 202 aaPredicted RBP9.77□□□□□ -0.85
SNCA-212ENST00000611107 MYOCDQ8IZQ8 938 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 CRIPAKQ8N1N5 446 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 LRRC71Q8N4P6 559 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 BANK1Q8NDB2 785 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 PHOSPHO2Q8TCD6 241 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 GDPD5Q8WTR4 605 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 PPM1EQ8WY54 764 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 RIT2Q99578 217 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 C17orf80Q9BSJ5 609 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 MTIF3Q9H2K0 278 aaKnown RBP9.77□□□□□ -0.85
SNCA-212ENST00000611107 TMEM60Q9H2L4 133 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 SLC28A3Q9HAS3 691 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 DDX25Q9UHL0 483 aaKnown RBP9.77□□□□□ -0.85
SNCA-212ENST00000611107 KIF3AQ9Y496 699 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 TRANK1O15050 2925 aa9.77□□□□□ -0.85
SNCA-212ENST00000611107 A0A0C4DFX4 3053 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 SMIM35A0A1B0GVV1 85 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 CAND2O75155 1236 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 GPR32O75388 356 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 UPP2O95045 317 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 PSAPP07602 524 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 FGFR4P22455 802 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 U2AF2P26368 475 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNCA-212ENST00000611107 KCNJ6P48051 423 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 NPEPPSP55786 919 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 HTRA4P83105 476 aaPredicted RBP9.76□□□□□ -0.85
SNCA-212ENST00000611107 KRT76Q01546 638 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 NBR1Q14596 966 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 SAFBQ15424 915 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNCA-212ENST00000611107 KIZQ2M2Z5 673 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 FAM160B1Q5W0V3 765 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 PLA2G4FQ68DD2 849 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 MOXD1Q6UVY6 613 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 MIER3Q7Z3K6 550 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 NEK8Q86SG6 692 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 NOSTRINQ8IVI9 506 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 SLC17A8Q8NDX2 589 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 ARNTL2Q8WYA1 636 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 SEPT8Q92599 483 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 TEKT3Q9BXF9 490 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 IFIH1Q9BYX4 1025 aaKnown RBP9.76□□□□□ -0.85
SNCA-212ENST00000611107 CELF4Q9BZC1 486 aaKnown RBP9.76□□□□□ -0.85
SNCA-212ENST00000611107 FOXP1Q9H334 677 aaPredicted RBP9.76□□□□□ -0.85
SNCA-212ENST00000611107 RC3H2Q9HBD1 1191 aaKnown RBP9.76□□□□□ -0.85
SNCA-212ENST00000611107 ERVK-5Q9HDB9 667 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 RGL1Q9NZL6 768 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 HCSTQ9UBK5 93 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 MTUS1Q9ULD2 1270 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 PADI3Q9ULW8 664 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 NOC2LQ9Y3T9 749 aaKnown RBP9.76□□□□□ -0.85
SNCA-212ENST00000611107 TRPV2Q9Y5S1 764 aa9.76□□□□□ -0.85
SNCA-212ENST00000611107 VPS37CA5D8V6 355 aaPredicted RBP9.75□□□□□ -0.85
SNCA-212ENST00000611107 WDR64B1ANS9 1081 aa9.75□□□□□ -0.85
SNCA-212ENST00000611107 CCNT1O60563 726 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms