RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 POLR2BP30876 1174 aaKnown RBP7.9□□□□□ -1.15
CSDE1-218ENST00000610726 HAUS6Q7Z4H7 955 aa7.9□□□□□ -1.15
CSDE1-218ENST00000610726 ARFGAP2Q8N6H7 521 aa7.9□□□□□ -1.15
CSDE1-218ENST00000610726 LRRC45Q96CN5 670 aa7.9□□□□□ -1.15
CSDE1-218ENST00000610726 CEP63Q96MT8 703 aa7.9□□□□□ -1.15
CSDE1-218ENST00000610726 JPH1Q9HDC5 661 aaPredicted RBP7.9□□□□□ -1.15
CSDE1-218ENST00000610726 PCDHAC2Q9Y5I4 1007 aa7.9□□□□□ -1.15
CSDE1-218ENST00000610726 DISP2A7MBM2 1401 aa7.9□□□□□ -1.15
CSDE1-218ENST00000610726 CAPN9O14815 690 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 ATP2A2P16615 1042 aaKnown RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 YWHABP31946 246 aaKnown RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 TGFB2P61812 414 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 CATSPER4Q7RTX7 472 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 RHPN2Q8IUC4 686 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 CERS5Q8N5B7 392 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 PSPC1Q8WXF1 523 aaKnown RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 FAM149B1Q96BN6 582 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 SPATA33Q96N06 139 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 REEP2Q9BRK0 252 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 NACA2Q9H009 215 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 AK9Q5TCS8 1911 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 ABL1P00519 1130 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 TTLL4Q14679 1199 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 PPP2R5DQ14738 602 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 MTF1Q14872 753 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 MICALCLQ6ZW33 695 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 FASTKD5Q7L8L6 764 aaKnown RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 SRGAP1Q7Z6B7 1085 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 TSNARE1Q96NA8 513 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 STMN4Q9H169 189 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 FAM169AQ9Y6X4 670 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 RGPD8O14715 1765 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 NRXN3Q9Y4C0 1643 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 MED1Q15648 1581 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 WNT10BO00744 389 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 STAM2O75886 525 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 RNF8O76064 485 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 DDNO94850 711 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 GGPS1O95749 300 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 TXNP10599 105 aaKnown RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 GUCY2DQ02846 1103 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 BSPRYQ5W0U4 402 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 EXOC8Q8IYI6 725 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 UHMK1Q8TAS1 419 aaKnown RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 FAM163AQ96GL9 167 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 TAAR1Q96RJ0 339 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 KRT12Q99456 494 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 KCNH7Q9NS40 1196 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 SEL1LQ9UBV2 794 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 RHOBTB3O94955 611 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 VEGFAP15692 232 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 MAPK4P31152 587 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 STAT5BP51692 787 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 NPEPPSP55786 919 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 MRPS25P82663 173 aaKnown RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 SLFN12LQ6IEE8 588 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 SLC30A10Q6XR72 485 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 CPLX4Q7Z7G2 160 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 MTRQ99707 1265 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 POLR3FQ9H1D9 316 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 RPF1Q9H9Y2 349 aaKnown RBP7.89□□□□□ -1.15
CSDE1-218ENST00000610726 RAB20Q9NX57 234 aa7.89□□□□□ -1.15
CSDE1-218ENST00000610726 SLIT3O75094 1523 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 RHBDL3P58872 404 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 PLA2G4FQ68DD2 849 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 RSPH3Q86UC2 560 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 CCDC89Q8N998 374 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 GIMAP8Q8ND71 665 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 FAM167AQ96KS9 214 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 C7orf25Q9BPX7 421 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 EHD4Q9H223 541 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 CALCOCO1Q9P1Z2 691 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 PEAK1Q9H792 1746 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 GOLGA6CA6NDK9 693 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 TBX3O15119 743 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 GOLGA6DP0CG33 693 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 HOXA7P31268 230 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 GFPT1Q06210 699 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 SF3A3Q12874 501 aaKnown RBP eCLIP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 HADHQ16836 314 aaKnown RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 KRT71Q3SY84 523 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 ZC2HC1CQ53FD0 456 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 C9orf131Q5VYM1 1079 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 LMBRD2Q68DH5 695 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 SCYL3Q8IZE3 742 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 MAGOHBQ96A72 148 aaKnown RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 TMEM143Q96AN5 459 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 FAM193BQ96PV7 902 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 TUFT1Q9NNX1 390 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 GOLGA6AQ9NYA3 693 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 FEZ2Q9UHY8 353 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-218ENST00000610726 MSH4O15457 936 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 CYTH3O43739 400 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 MYL3P08590 195 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 RPA1P27694 616 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 ZNF568Q3ZCX4 644 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 CAPN12Q6ZSI9 719 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 CATSPER3Q86XQ3 398 aa7.88□□□□□ -1.15
CSDE1-218ENST00000610726 KSR1Q8IVT5 923 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms