RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 SLC7A4O43246 635 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 RIPK2O43353 540 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 POP4O95707 220 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 PHKA1P46020 1223 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 BCAMP50895 628 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 ROR2Q01974 943 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 NR5A1Q13285 461 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 MSLNQ13421 630 aaPredicted RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 FAM26DQ5JW98 314 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 C6orf132Q5T0Z8 1188 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 PPP1R42Q7Z4L9 355 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 SPARTQ8N0X7 666 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 CBARPQ8N350 705 aaPredicted RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 EPS8L1Q8TE68 723 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 GFM2Q969S9 779 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 KIAA1683Q9H0B3 1180 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 DDX25Q9UHL0 483 aaKnown RBP6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 GRID1Q9ULK0 1009 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 C1orf167Q5SNV9 1468 aa6.34□□□□□ -1.39
COL4A3BP-207ENST00000604926 MYPNQ86TC9 1320 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 SYNJ2BP-COX16A0A087WUM0 186 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 ARHGAP10A1A4S6 786 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 TRIM43BA6NCK2 446 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 A8MVJ9 347 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 STRNO43815 780 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 SOCS5O75159 536 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 HEXBP07686 556 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 PRKACBP22694 351 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 HTR3AP46098 478 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 AP3M2P53677 418 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 PRKG2Q13237 762 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 ELF2Q15723 593 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 FAM209AQ5JX71 171 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 LDHAL6AQ6ZMR3 332 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 IKBIPQ70UQ0 350 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 GAS2L3Q86XJ1 694 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 SYT2Q8N9I0 419 aaPredicted RBP6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 UPF1Q92900 1129 aaKnown RBP eCLIP6.34□□□□□ -1.47e-7■■■□□ 19.2
COL4A3BP-207ENST00000604926 BTBD6Q96KE9 485 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 STRBPQ96SI9 672 aaKnown RBP6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 FSD1Q9BTV5 496 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 TRIM5Q9C035 493 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 CCDC8Q9H0W5 538 aaPredicted RBP6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 TNKS2Q9H2K2 1166 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 LIN28AQ9H9Z2 209 aaKnown RBP6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 ABCB6Q9NP58 842 aa6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.34□□□□□ -1.4
COL4A3BP-207ENST00000604926 MYOM3Q5VTT5 1437 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 ROCK2O75116 1388 aaKnown RBP6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 GOLGA8JA6NMD2 632 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 GOLGA8TH3BQL2 631 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 ARHGAP33O14559 1287 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 GPR37L1O60883 481 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 YEATS4O95619 227 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 GOLGA8HP0CJ92 632 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 IDO1P14902 403 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZKSCAN1P17029 563 aaPredicted RBP6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 PLCD1P51178 756 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 KDSRQ06136 332 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 ERFEQ4G0M1 354 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 HECTD3Q5T447 861 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 CNSTQ6PJW8 725 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 SLC2A7Q6PXP3 512 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 DBX2Q6ZNG2 339 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 CAND1Q86VP6 1230 aaKnown RBP6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZNF565Q8N9K5 539 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 POF1BQ8WVV4 589 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 SETDB2Q96T68 719 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZCWPW1Q9H0M4 648 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 HMGXB4Q9UGU5 601 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 DPP7Q9UHL4 492 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 LEMD3Q9Y2U8 911 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 MTUS2Q5JR59 1369 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 HNRNPCL2B2RXH8 293 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 YKT6O15498 198 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 TREHO43280 583 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 PDE8AO60658 829 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 HNRNPCL1O60812 293 aaKnown RBP6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 OR5F1O95221 314 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 GUCY1A2P33402 732 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 PPP1R2P41236 205 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 PPP1R2P3Q6NXS1 205 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 NUP54Q7Z3B4 507 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 TADA2BQ86TJ2 420 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 EPHX4Q8IUS5 362 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 LSMEM2Q8N112 164 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 NSUN6Q8TEA1 469 aaKnown RBP6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 NCLNQ969V3 563 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZNF845Q96IR2 970 aaPredicted RBP6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZNF408Q9H9D4 720 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 KIAA1586Q9HCI6 787 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 TEKT2Q9UIF3 430 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 DMTF1Q9Y222 760 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 CFL2Q9Y281 166 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 EMILIN1Q9Y6C2 1016 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 RAB3GAP2Q9H2M9 1393 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 SLIT2O94813 1529 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 PXDNQ92626 1479 aa6.33□□□□□ -1.4
COL4A3BP-207ENST00000604926 LOC105371267A0A1B0GV96 52 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 A0A1B0GVG6 124 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms