RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 FKBP3Q00688 224 aaKnown RBP13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 MAPK7Q13164 816 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 MYBPC2Q14324 1141 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 NR1I3Q14994 352 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 CELF3Q5SZQ8 465 aaKnown RBP13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ANKRD40Q6AI12 368 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SEPT14Q6ZU15 432 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ARMCX2Q7L311 632 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SFR1Q86XK3 245 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 GOLGA5Q8TBA6 731 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SCFD1Q8WVM8 642 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 KIFAP3Q92845 792 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 EMID1Q96A84 441 aaPredicted RBP13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 IQCDQ96DY2 449 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 KCTD10Q9H3F6 313 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SEMA6BQ9H3T3 888 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 GABBR1Q9UBS5 961 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ZKSCAN5Q9Y2L8 839 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 KAT6AQ92794 2004 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 THSD7BQ9C0I4 1608 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 A0A1W2PQC6 194 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 TRIM49BA6NDI0 452 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 H0YCG3 227 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 NKRFO15226 690 aaKnown RBP eCLIP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 GAS2O43903 313 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 LGR5O75473 907 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 PPP1R37O75864 691 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 TOMM70O94826 608 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 STBD1O95210 358 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 PBX1P40424 430 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 SP2Q02086 613 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 TRIM14Q14142 442 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 KRT31Q15323 416 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 UGCGQ16739 394 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 KNOP1Q1ED39 458 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 WDR78Q5VTH9 848 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 C17orf99Q6UX52 265 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 LRRC55Q6ZSA7 311 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 ANO5Q75V66 913 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 CYFIP1Q7L576 1253 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 PLPPR4Q7Z2D5 763 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 FILIP1Q7Z7B0 1213 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 IRF2BP1Q8IU81 584 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 FIZ1Q96SL8 496 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 STRA6Q9BX79 667 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 SRRTQ9BXP5 876 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 NIFKQ9BYG3 293 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 MRPL44Q9H9J2 332 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 ZFYVE28Q9HCC9 887 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 ZNF302Q9NR11 478 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 TYW1Q9NV66 732 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 MAPK8IP1Q9UQF2 711 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 PCDHB13Q9Y5F0 798 aa13.58□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 NPHP3-ACAD11A0A0J9YXS1 232 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 LGALS16A8MUM7 142 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 NRDCO43847 1150 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 CALUO43852 315 aaPredicted RBP13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 ZNF862O60290 1169 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 HIP1RO75146 1068 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 OATP04181 439 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 PLS3P13797 630 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 RFC5P40937 340 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 PRKCEQ02156 737 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 MORN1Q5T089 497 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 SPECC1LQ69YQ0 1117 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 SWSAP1Q6NVH7 229 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 ZNF720Q7Z2F6 126 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 FAM178BQ8IXR5 827 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 SPIRE2Q8WWL2 714 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 SOCS4Q8WXH5 440 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 ABHD16BQ9H3Z7 469 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 PDLIM7Q9NR12 457 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 INTS13Q9NVM9 706 aa13.57□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 GSTTP1A0A1W2PQM5 241 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 ESPNB1AK53 854 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 SLC16A3O15427 465 aaKnown RBP13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 COBLO75128 1261 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 GGPS1O95749 300 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 KCNJ6P48051 423 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 DNM2P50570 870 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 COPB1P53618 953 aaKnown RBP13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 TBX2Q13207 712 aaPredicted RBP13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 LAMC2Q13753 1193 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 XKR9Q5GH70 373 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 ODR4Q5SWX8 454 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 C12orf56Q8IXR9 622 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 DAW1Q8N136 415 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 CCDC112Q8NEF3 446 aa13.56□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 HPS3Q969F9 1004 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms