RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 YBX2Q9Y2T7 364 aaKnown RBP12.99□□□□□ -0.33
CCDC12-209ENST00000604164 PPME1Q9Y570 386 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 INSL6Q9Y581 213 aa12.99□□□□□ -0.33
CCDC12-209ENST00000604164 NEMFO60524 1076 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 GJB5O95377 273 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 C22orf31O95567 290 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 P4HBP07237 508 aaKnown RBP12.98□□□□□ -0.33
CCDC12-209ENST00000604164 CA3P07451 260 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
CCDC12-209ENST00000604164 DNM2P50570 870 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 FOSBP53539 338 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 TBC1D8BQ0IIM8 1120 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 PAK2Q13177 524 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 LPIN1Q14693 890 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 GRIN2CQ14957 1233 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 CALCRLQ16602 461 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 TRMT1LQ7Z2T5 733 aaKnown RBP12.98□□□□□ -0.33
CCDC12-209ENST00000604164 MYOCDQ8IZQ8 938 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
CCDC12-209ENST00000604164 NIFKQ9BYG3 293 aaKnown RBP12.98□□□□□ -0.33
CCDC12-209ENST00000604164 NOL7Q9UMY1 257 aaKnown RBP12.98□□□□□ -0.33
CCDC12-209ENST00000604164 ZBTB42B2RXF5 422 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 TRAPPC10P48553 1259 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 DEFB103AP81534 67 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 EPHA7Q15375 998 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 EFCAB12Q6NXP0 572 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 OTUD6AQ7L8S5 288 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 KIAA0319LQ8IZA0 1049 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 NEK9Q8TD19 979 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 MYLIPQ8WY64 445 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 GJA10Q969M2 543 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 SEPT9Q9UHD8 586 aaPredicted RBP12.97□□□□□ -0.33
CCDC12-209ENST00000604164 VAV3Q9UKW4 847 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 PCDHA12Q9UN75 941 aa12.97□□□□□ -0.33
CCDC12-209ENST00000604164 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.97□□□□□ -0.33
CCDC12-209ENST00000604164 MYH9P35579 1960 aaKnown RBP12.97□□□□□ -0.33
CCDC12-209ENST00000604164 DDX11L8A8MPP1 907 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 GPR182O15218 404 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 ZNF862O60290 1169 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 DTNBO60941 627 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 MYOGP15173 224 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 CRYBB1P53674 252 aaPredicted RBP12.96□□□□□ -0.33
CCDC12-209ENST00000604164 GUCY1B3Q02153 619 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
CCDC12-209ENST00000604164 UGCGQ16739 394 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 EARS2Q5JPH6 523 aaKnown RBP12.96□□□□□ -0.33
CCDC12-209ENST00000604164 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC12-209ENST00000604164 NOSTRINQ8IVI9 506 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 TET1Q8NFU7 2136 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 HAS1Q92839 578 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 TOP1MTQ969P6 601 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 TMX3Q96JJ7 454 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 YME1L1Q96TA2 773 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 AKT3Q9Y243 479 aa12.96□□□□□ -0.33
CCDC12-209ENST00000604164 FAM205CA6NFA0 338 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 GAS2O43903 313 aaKnown RBP12.95□□□□□ -0.34
CCDC12-209ENST00000604164 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 STAG3L1P0CL83 205 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 TAP1Q03518 808 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 TMEM62Q0P6H9 643 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 TARBP2Q15633 366 aaKnown RBP12.95□□□□□ -0.34
CCDC12-209ENST00000604164 TCTN1Q2MV58 587 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 NCAPH2Q6IBW4 605 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 C4orf19Q8IY42 314 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 BANK1Q8NDB2 785 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 MAFAQ8NHW3 353 aaPredicted RBP12.95□□□□□ -0.34
CCDC12-209ENST00000604164 SLC7A3Q8WY07 619 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 ZBTB10Q96DT7 871 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 SCLT1Q96NL6 688 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 SAMD11Q96NU1 681 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 PRDM12Q9H4Q4 367 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 TTC12Q9H892 705 aaPredicted RBP12.95□□□□□ -0.34
CCDC12-209ENST00000604164 SUGCTQ9HAC7 445 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 GINS2Q9Y248 185 aa12.95□□□□□ -0.34
CCDC12-209ENST00000604164 EML1O00423 815 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 ENPP3O14638 875 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
CCDC12-209ENST00000604164 CD52P31358 61 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 MCM7P33993 719 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 RFC5P40937 340 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 CLCN3P51790 818 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 HTRA4P83105 476 aaPredicted RBP12.94□□□□□ -0.34
CCDC12-209ENST00000604164 NFX1Q12986 1120 aaKnown RBP12.94□□□□□ -0.34
CCDC12-209ENST00000604164 MTERF2Q49AM1 385 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 FAM117BQ6P1L5 589 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 TGS1Q96RS0 853 aaKnown RBP12.94□□□□□ -0.34
CCDC12-209ENST00000604164 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 C1orf112Q9NSG2 853 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 PADI3Q9ULW8 664 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 SMC3Q9UQE7 1217 aa12.94□□□□□ -0.34
CCDC12-209ENST00000604164 LAMA2P24043 3122 aaKnown RBP12.93□□□□□ -0.34
CCDC12-209ENST00000604164 SZT2Q5T011 3432 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.93□□□□□ -0.34
CCDC12-209ENST00000604164 DENND3A2RUS2 1198 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 H3BQV1 296 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 UPP2O95045 317 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 VTNP04004 478 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 ATP2B1P20020 1258 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms