RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 NPAS4Q8IUM7 802 aa24.05■■□□□ 1.44
PPFIA3-209ENST00000602783 FAM178BQ8IXR5 827 aa24.05■■□□□ 1.44
PPFIA3-209ENST00000602783 CKAP2LQ8IYA6 745 aa24.05■■□□□ 1.44
PPFIA3-209ENST00000602783 KIAA0319LQ8IZA0 1049 aa24.05■■□□□ 1.44
PPFIA3-209ENST00000602783 CRIPAKQ8N1N5 446 aa24.05■■□□□ 1.44
PPFIA3-209ENST00000602783 LMAN2LQ9H0V9 348 aa24.05■■□□□ 1.44
PPFIA3-209ENST00000602783 LOXHD1Q8IVV2 1947 aa24.05■■□□□ 1.44
PPFIA3-209ENST00000602783 STAG3L1P0CL83 205 aa24.04■■□□□ 1.44
PPFIA3-209ENST00000602783 ATP4AP20648 1035 aa24.04■■□□□ 1.44
PPFIA3-209ENST00000602783 SETQ01105 290 aaPredicted RBP24.04■■□□□ 1.44
PPFIA3-209ENST00000602783 TRMT1LQ7Z2T5 733 aaKnown RBP24.04■■□□□ 1.44
PPFIA3-209ENST00000602783 RASGRP4Q8TDF6 673 aa24.04■■□□□ 1.44
PPFIA3-209ENST00000602783 KHSRPQ92945 711 aaKnown RBP eCLIP24.04■■□□□ 1.44
PPFIA3-209ENST00000602783 TM6SF1Q9BZW5 370 aa24.04■■□□□ 1.44
PPFIA3-209ENST00000602783 CDHR5Q9HBB8 845 aa24.04■■□□□ 1.44
PPFIA3-209ENST00000602783 COL1A2P08123 1366 aa24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 GRXCR2A6NFK2 248 aa24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 IBSPP21815 317 aaPredicted RBP24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 PUS10Q3MIT2 529 aaKnown RBP24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 PRR16Q569H4 304 aa24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 ZNF746Q6NUN9 644 aaPredicted RBP24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 CMTR2Q8IYT2 770 aaKnown RBP24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 CCDC148Q8NFR7 591 aa24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 PLVAPQ9BX97 442 aa24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 TMX1Q9H3N1 280 aa24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 ALG13Q9NP73 1137 aaKnown RBP24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 CLDND1Q9NY35 253 aa24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 MAFBQ9Y5Q3 323 aaPredicted RBP24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 MRPL42Q9Y6G3 142 aaKnown RBP24.03■■□□□ 1.44
PPFIA3-209ENST00000602783 ZBTB42B2RXF5 422 aa24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 RPS6KA5O75582 802 aa24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 CSPG5O95196 566 aa24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 PAN2Q504Q3 1202 aaKnown RBP24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 GJD3Q8N144 294 aa24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 BICD2Q8TD16 824 aa24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 LARP6Q9BRS8 491 aaKnown RBP24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 VPS54Q9P1Q0 977 aa24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 TCEAL9Q9UHQ7 104 aa24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 LRFN2Q9ULH4 789 aa24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 NOC2LQ9Y3T9 749 aaKnown RBP24.02■■□□□ 1.44
PPFIA3-209ENST00000602783 EVPLQ92817 2033 aa24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 NCK2O43639 380 aa24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 PSAPP07602 524 aa24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 CIITAP33076 1130 aa24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 COL19A1Q14993 1142 aa24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 SMAP1Q8IYB5 467 aaPredicted RBP24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 BBXQ8WY36 941 aaPredicted RBP24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 ERVK-5Q9HDB9 667 aa24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 PLAGL2Q9UPG8 496 aa24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 PCDHA10Q9Y5I2 948 aa24.01■■□□□ 1.43
PPFIA3-209ENST00000602783 SSTR3P32745 418 aaPredicted RBP24■■□□□ 1.43
PPFIA3-209ENST00000602783 GATMP50440 423 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 TMEM40Q8WWA1 233 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 P2RX5Q93086 422 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 ZNF274Q96GC6 653 aaPredicted RBP24■■□□□ 1.43
PPFIA3-209ENST00000602783 PPP1R16BQ96T49 567 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 LRFN3Q9BTN0 628 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 PDRG1Q9NUG6 133 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 GABBR1Q9UBS5 961 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 ST3GAL5Q9UNP4 418 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 SAMM50Q9Y512 469 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 WDR81Q562E7 1941 aa24■■□□□ 1.43
PPFIA3-209ENST00000602783 MGEA5O60502 916 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 C22orf31O95567 290 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 MMP1P03956 469 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 SARSP49591 514 aaKnown RBP23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 HYAL1Q12794 435 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 STK3Q13188 491 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 KIZQ2M2Z5 673 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 ODR4Q5SWX8 454 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 TRIM22Q8IYM9 498 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 METTL13Q8N6R0 699 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 ADAM2Q99965 735 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 IGFLR1Q9H665 355 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 PCDHB7Q9Y5E2 793 aa23.99■■□□□ 1.43
PPFIA3-209ENST00000602783 MYH9P35579 1960 aaKnown RBP23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 DENND3A2RUS2 1198 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 PI4K2BG5E9Z4 385 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 CPLX1O14810 134 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 GPR182O15218 404 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 VTNP04004 478 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 ITGB1P05556 798 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 LTBRP36941 435 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 SSRP1Q08945 709 aaKnown RBP23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 CAMK1Q14012 370 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 NAALADL2Q58DX5 795 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 TMEM31Q5JXX7 168 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 KLHL23Q8NBE8 558 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 LENG9Q96B70 501 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 SH3GLB2Q9NR46 395 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 FAM50BQ9Y247 325 aa23.98■■□□□ 1.43
PPFIA3-209ENST00000602783 EDIL3O43854 480 aa23.97■■□□□ 1.43
PPFIA3-209ENST00000602783 GTF2F1P35269 517 aaKnown RBP eCLIP23.97■■□□□ 1.43
PPFIA3-209ENST00000602783 CRYBB1P53674 252 aaPredicted RBP23.97■■□□□ 1.43
PPFIA3-209ENST00000602783 NLRP5P59047 1200 aa23.97■■□□□ 1.43
PPFIA3-209ENST00000602783 CTC1Q2NKJ3 1217 aa23.97■■□□□ 1.43
PPFIA3-209ENST00000602783 FAM43BQ6ZT52 329 aaPredicted RBP23.97■■□□□ 1.43
PPFIA3-209ENST00000602783 SPPL3Q8TCT6 385 aa23.97■■□□□ 1.43
PPFIA3-209ENST00000602783 OSMRQ99650 979 aa23.97■■□□□ 1.43
PPFIA3-209ENST00000602783 RGS18Q9NS28 235 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms