RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 KCNA4P22459 653 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 GTF2F1P35269 517 aaKnown RBP eCLIP14.94□□□□□ -0.02
RPS28-204ENST00000602140 PLA2G5P39877 138 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 GATMP50440 423 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 CTC1Q2NKJ3 1217 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 ZNF484Q5JVG2 852 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 MCTP2Q6DN12 878 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 BLOC1S2Q6QNY1 142 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 TRMT1LQ7Z2T5 733 aaKnown RBP14.94□□□□□ -0.02
RPS28-204ENST00000602140 CKAP2LQ8IYA6 745 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 REXO1Q8N1G1 1221 aaKnown RBP14.94□□□□□ -0.02
RPS28-204ENST00000602140 CCDC12Q8WUD4 166 aaPredicted RBP14.94□□□□□ -0.02
RPS28-204ENST00000602140 P2RX5Q93086 422 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 PHKBQ93100 1093 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 IGFLR1Q9H665 355 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 TBC1D22BQ9NU19 505 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 NOC2LQ9Y3T9 749 aaKnown RBP14.94□□□□□ -0.02
RPS28-204ENST00000602140 COL1A2P08123 1366 aa14.94□□□□□ -0.02
RPS28-204ENST00000602140 ZBTB42B2RXF5 422 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 PRPF3O43395 683 aaKnown RBP14.93□□□□□ -0.02
RPS28-204ENST00000602140 MGEA5O60502 916 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 PPFIA3O75145 1194 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 RPS6KA5O75582 802 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 ITGB1P05556 798 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 GNA11P29992 359 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 HSPA4P34932 840 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 SARSP49591 514 aaKnown RBP14.93□□□□□ -0.02
RPS28-204ENST00000602140 SETQ01105 290 aaPredicted RBP14.93□□□□□ -0.02
RPS28-204ENST00000602140 DLX2Q07687 328 aaPredicted RBP14.93□□□□□ -0.02
RPS28-204ENST00000602140 CAMK1Q14012 370 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 CLUL1Q15846 466 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 NAALADL2Q58DX5 795 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 ZNF746Q6NUN9 644 aaPredicted RBP14.93□□□□□ -0.02
RPS28-204ENST00000602140 PPP4R3CPQ6ZMV5 832 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 KLHL23Q8NBE8 558 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 SPPL3Q8TCT6 385 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 RASGRP4Q8TDF6 673 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 TMEM40Q8WWA1 233 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 FAM122AQ96E09 287 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 PPP1R16BQ96T49 567 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 ERVK-5Q9HDB9 667 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 HCN4Q9Y3Q4 1203 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 PCDHB7Q9Y5E2 793 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 MAFBQ9Y5Q3 323 aaPredicted RBP14.93□□□□□ -0.02
RPS28-204ENST00000602140 ATG2AQ2TAZ0 1938 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 LOXHD1Q8IVV2 1947 aa14.93□□□□□ -0.02
RPS28-204ENST00000602140 MYO7AQ13402 2215 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 DENND3A2RUS2 1198 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 C22orf31O95567 290 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 RPS6KB1P23443 525 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 DNAJB1P25685 340 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 AKAP17AQ02040 695 aaKnown RBP14.92□□□□□ -0.02
RPS28-204ENST00000602140 ZP2Q05996 745 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 KIZQ2M2Z5 673 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 PRR16Q569H4 304 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 SMAP1Q8IYB5 467 aaPredicted RBP14.92□□□□□ -0.02
RPS28-204ENST00000602140 BBXQ8WY36 941 aaPredicted RBP14.92□□□□□ -0.02
RPS28-204ENST00000602140 ADAM2Q99965 735 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 PRKAG3Q9UGI9 489 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 TCEAL9Q9UHQ7 104 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 ST3GAL5Q9UNP4 418 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 PCDHA10Q9Y5I2 948 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 NID2Q14112 1375 aa14.92□□□□□ -0.02
RPS28-204ENST00000602140 GPR182O15218 404 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 LINC01565O15544 149 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 TBX10O75333 385 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 VTNP04004 478 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 PSAPP07602 524 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 ALADP13716 330 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 CIITAP33076 1130 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 CRYBB1P53674 252 aaPredicted RBP14.91□□□□□ -0.02
RPS28-204ENST00000602140 NTRK3Q16288 839 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 ODR4Q5SWX8 454 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 ADHFE1Q8IWW8 467 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 FBXL16Q8N461 479 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 METTL13Q8N6R0 699 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 BICD2Q8TD16 824 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 POF1BQ8WVV4 589 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 OSMRQ99650 979 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 SLC26A6Q9BXS9 759 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 AGXT2Q9BYV1 514 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 RGS18Q9NS28 235 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 GABBR1Q9UBS5 961 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 SAMM50Q9Y512 469 aa14.91□□□□□ -0.02
RPS28-204ENST00000602140 C5orf42Q9H799 3197 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 KIAA1671Q9BY89 1806 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 MBTPS2O43462 519 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 GPR32O75388 356 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 PSMA5P28066 241 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 IRS1P35568 1242 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 ADAM15Q13444 863 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 SMAD2Q15796 467 aaKnown RBP14.9□□□□□ -0.02
RPS28-204ENST00000602140 SPOUT1Q5T280 376 aaKnown RBP14.9□□□□□ -0.02
RPS28-204ENST00000602140 FAM102BQ5T8I3 360 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 FAM43BQ6ZT52 329 aaPredicted RBP14.9□□□□□ -0.02
RPS28-204ENST00000602140 SLC24A5Q71RS6 500 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 ADGRD2Q7Z7M1 963 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 FAM228AQ86W67 206 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 PPP2R3CQ969Q6 453 aa14.9□□□□□ -0.02
RPS28-204ENST00000602140 LENG9Q96B70 501 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms