RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 C8orf76Q96K31 380 aa19.72■□□□□ 0.75
IRF3-230ENST00000601809 FAM167AQ96KS9 214 aa19.72■□□□□ 0.75
IRF3-230ENST00000601809 FAM49AQ9H0Q0 323 aaPredicted RBP19.72■□□□□ 0.75
IRF3-230ENST00000601809 AGO3Q9H9G7 860 aaKnown RBP19.72■□□□□ 0.75
IRF3-230ENST00000601809 SAMM50Q9Y512 469 aa19.72■□□□□ 0.75
IRF3-230ENST00000601809 SQORQ9Y6N5 450 aa19.72■□□□□ 0.75
IRF3-230ENST00000601809 GHRP10912 638 aa19.71■□□□□ 0.75
IRF3-230ENST00000601809 TRIM29Q14134 588 aa19.71■□□□□ 0.75
IRF3-230ENST00000601809 NME8Q8N427 588 aa19.71■□□□□ 0.75
IRF3-230ENST00000601809 SEPT8Q92599 483 aa19.71■□□□□ 0.75
IRF3-230ENST00000601809 MTMR9Q96QG7 549 aa19.71■□□□□ 0.75
IRF3-230ENST00000601809 IFIH1Q9BYX4 1025 aaKnown RBP19.71■□□□□ 0.75
IRF3-230ENST00000601809 WRAP73Q9P2S5 460 aaPredicted RBP19.71■□□□□ 0.75
IRF3-230ENST00000601809 MSRAQ9UJ68 235 aa19.71■□□□□ 0.75
IRF3-230ENST00000601809 TRPV2Q9Y5S1 764 aa19.71■□□□□ 0.75
IRF3-230ENST00000601809 COL4A6Q14031 1691 aa19.71■□□□□ 0.75
IRF3-230ENST00000601809 KIF28PB7ZC32 967 aa19.7■□□□□ 0.74
IRF3-230ENST00000601809 GJB5O95377 273 aa19.7■□□□□ 0.74
IRF3-230ENST00000601809 KCNJ6P48051 423 aa19.7■□□□□ 0.74
IRF3-230ENST00000601809 TSHZ1Q6ZSZ6 1077 aa19.7■□□□□ 0.74
IRF3-230ENST00000601809 CKAP2LQ8IYA6 745 aa19.7■□□□□ 0.74
IRF3-230ENST00000601809 APBB2Q92870 758 aa19.7■□□□□ 0.74
IRF3-230ENST00000601809 NIFKQ9BYG3 293 aaKnown RBP19.7■□□□□ 0.74
IRF3-230ENST00000601809 FOXP1Q9H334 677 aaPredicted RBP19.7■□□□□ 0.74
IRF3-230ENST00000601809 CDHR5Q9HBB8 845 aa19.7■□□□□ 0.74
IRF3-230ENST00000601809 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
IRF3-230ENST00000601809 CA3P07451 260 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 U2AF2P26368 475 aaKnown RBP eCLIP19.69■□□□□ 0.74
IRF3-230ENST00000601809 TMEM62Q0P6H9 643 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 IER5Q5VY09 327 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 LINC01599Q8WXQ3 324 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 MYLIPQ8WY64 445 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 CELF4Q9BZC1 486 aaKnown RBP19.69■□□□□ 0.74
IRF3-230ENST00000601809 TMEM60Q9H2L4 133 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 CEP131Q9UPN4 1083 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 ARID2Q68CP9 1835 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 PRUNE2Q8WUY3 3088 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 REV3LO60673 3130 aa19.69■□□□□ 0.74
IRF3-230ENST00000601809 IGKV6-21A0A0C4DH24 114 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 LCHNA4D1U4 455 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 TMEM150BA6NC51 233 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 GPR32O75388 356 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 MCM2P49736 904 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 HTRA4P83105 476 aaPredicted RBP19.68■□□□□ 0.74
IRF3-230ENST00000601809 XKR3Q5GH77 459 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 ANO5Q75V66 913 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 SLFN12Q8IYM2 578 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 CRIPAKQ8N1N5 446 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 BANK1Q8NDB2 785 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 TMEM40Q8WWA1 233 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 NRBP2Q9NSY0 501 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 TTC3P53804 2025 aa19.68■□□□□ 0.74
IRF3-230ENST00000601809 MAGEB2O15479 319 aa19.67■□□□□ 0.74
IRF3-230ENST00000601809 CD52P31358 61 aa19.67■□□□□ 0.74
IRF3-230ENST00000601809 PSMC5P62195 406 aa19.67■□□□□ 0.74
IRF3-230ENST00000601809 TAP1Q03518 808 aa19.67■□□□□ 0.74
IRF3-230ENST00000601809 EPHA7Q15375 998 aa19.67■□□□□ 0.74
IRF3-230ENST00000601809 SAFBQ15424 915 aaKnown RBP eCLIP19.67■□□□□ 0.74
IRF3-230ENST00000601809 TRMT1LQ7Z2T5 733 aaKnown RBP19.67■□□□□ 0.74
IRF3-230ENST00000601809 SPRED2Q7Z698 418 aa19.67■□□□□ 0.74
IRF3-230ENST00000601809 RTN4RL1Q86UN2 441 aaPredicted RBP19.67■□□□□ 0.74
IRF3-230ENST00000601809 USP38Q8NB14 1042 aa19.67■□□□□ 0.74
IRF3-230ENST00000601809 TOP1MTQ969P6 601 aa19.67■□□□□ 0.74
IRF3-230ENST00000601809 SLC28A3Q9HAS3 691 aa19.67■□□□□ 0.74
IRF3-230ENST00000601809 NEMFO60524 1076 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 P4HBP07237 508 aaKnown RBP19.66■□□□□ 0.74
IRF3-230ENST00000601809 CLCN3P51790 818 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 ADGRE1Q14246 886 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 PPP2R2DQ66LE6 453 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 NOSTRINQ8IVI9 506 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 FAM184AQ8NB25 1140 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 SP7Q8TDD2 431 aaPredicted RBP19.66■□□□□ 0.74
IRF3-230ENST00000601809 RAD9AQ99638 391 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 ADAMTS10Q9H324 1103 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 TMX1Q9H3N1 280 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 PADI3Q9ULW8 664 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 UNC80Q8N2C7 3258 aa19.66■□□□□ 0.74
IRF3-230ENST00000601809 SPTBN5Q9NRC6 3674 aaKnown RBP19.65■□□□□ 0.74
IRF3-230ENST00000601809 COL4A4P53420 1690 aaPredicted RBP19.65■□□□□ 0.74
IRF3-230ENST00000601809 EPOPA6NHQ4 379 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 ENPP3O14638 875 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 TLL1O43897 1013 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 AMHP03971 560 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 VTNP04004 478 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 QARSP47897 775 aaKnown RBP19.65■□□□□ 0.74
IRF3-230ENST00000601809 TOB1P50616 345 aaPredicted RBP19.65■□□□□ 0.74
IRF3-230ENST00000601809 DRP2Q13474 957 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 CUL4AQ13619 759 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 CALCRLQ16602 461 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 EFCAB12Q6NXP0 572 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 C4orf19Q8IY42 314 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 C4orf32Q8N8J7 132 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 HSD17B14Q9BPX1 270 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 PRDM12Q9H4Q4 367 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 RC3H2Q9HBD1 1191 aaKnown RBP19.65■□□□□ 0.74
IRF3-230ENST00000601809 ERVK-5Q9HDB9 667 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 RGL1Q9NZL6 768 aa19.65■□□□□ 0.74
IRF3-230ENST00000601809 NOC2LQ9Y3T9 749 aaKnown RBP19.65■□□□□ 0.74
IRF3-230ENST00000601809 MYO9BQ13459 2157 aa19.64■□□□□ 0.74
IRF3-230ENST00000601809 SLITRK3O94933 977 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms