RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 CPLX1O14810 134 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 MSH4O15457 936 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 DGKIO75912 1065 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 DEXIO95424 95 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 PSAPP07602 524 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 SSRP1Q08945 709 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 STK3Q13188 491 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 TMEM266Q2M3C6 531 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 TIGD5Q53EQ6 642 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 CRIPAKQ8N1N5 446 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 TMEM40Q8WWA1 233 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 TMX1Q9H3N1 280 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 GABBR1Q9UBS5 961 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 PCDHA4Q9UN74 947 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 GINS2Q9Y248 185 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 SAMM50Q9Y512 469 aa17.02■□□□□ 0.32
SHKBP1-226ENST00000600791 KIAA1671Q9BY89 1806 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 WDR64B1ANS9 1081 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 USP11P51784 963 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 BTG3Q14201 252 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 TRMT1LQ7Z2T5 733 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 NPAS4Q8IUM7 802 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 BANK1Q8NDB2 785 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 CLP1Q92989 425 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 AIFM3Q96NN9 605 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 CDHR5Q9HBB8 845 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 PDRG1Q9NUG6 133 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 RWDD3Q9Y3V2 267 aa17.01■□□□□ 0.31
SHKBP1-226ENST00000600791 M0R2N6 131 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 RB1P06400 928 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 BMPR1AP36894 532 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 NFX1Q12986 1120 aaKnown RBP17■□□□□ 0.31
SHKBP1-226ENST00000600791 NPY5RQ15761 445 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 SLC5A5Q92911 643 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 PPP1R16BQ96T49 567 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 RIT2Q99578 217 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 C11orf84Q9BUA3 381 aaPredicted RBP17■□□□□ 0.31
SHKBP1-226ENST00000600791 ERVK-5Q9HDB9 667 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 DISC1Q9NRI5 854 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 CEP131Q9UPN4 1083 aa17■□□□□ 0.31
SHKBP1-226ENST00000600791 NOC2LQ9Y3T9 749 aaKnown RBP17■□□□□ 0.31
SHKBP1-226ENST00000600791 CHMP2AO43633 222 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 ZNF862O60290 1169 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 MGEA5O60502 916 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 GAS7O60861 476 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 TDP2O95551 362 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 VTNP04004 478 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 OATP04181 439 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 KCNA5P22460 613 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 UGCGQ16739 394 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 KIZQ2M2Z5 673 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 TCEAL5Q5H9L2 206 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 LRCH2Q5VUJ6 765 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 CPLX2Q6PUV4 134 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 CMTR2Q8IYT2 770 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 BLIDQ8IZY5 108 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 METTL13Q8N6R0 699 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 DAGLBQ8NCG7 672 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 GJA10Q969M2 543 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 FAM167AQ96KS9 214 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 C22orf23Q9BZE7 217 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 UNC45AQ9H3U1 944 aa16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 NSUN3Q9H649 340 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 MRPL42Q9Y6G3 142 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-226ENST00000600791 GRM6O15303 877 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 GPR32O75388 356 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 STAG3L1P0CL83 205 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 CLCN3P51790 818 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 CRYBB1P53674 252 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 PRKCEQ02156 737 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 SCRN1Q12765 414 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 LEXMQ3ZCV2 418 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 Q4G0T1 1027 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 PAN2Q504Q3 1202 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 FAM177A1Q8N128 213 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 OSMRQ99650 979 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 TEKT3Q9BXF9 490 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 ST3GAL5Q9UNP4 418 aa16.98■□□□□ 0.31
SHKBP1-226ENST00000600791 CYP3A7-CYP3A51PA0A087WV96 503 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 PSMD10O75832 226 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 CYP3A7P24462 503 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 SFNP31947 248 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 SARSP49591 514 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 GATMP50440 423 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 JAK3P52333 1124 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 COL19A1Q14993 1142 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 FAM228AQ86W67 206 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 LINC01465Q8N7H1 131 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 ADAM2Q99965 735 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 PLVAPQ9BX97 442 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 LMAN2LQ9H0V9 348 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 PPP4R2Q9NY27 417 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 LRFN2Q9ULH4 789 aa16.97■□□□□ 0.31
SHKBP1-226ENST00000600791 DENND3A2RUS2 1198 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 GPR182O15218 404 aa16.96■□□□□ 0.31
SHKBP1-226ENST00000600791 MAGEB2O15479 319 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms