RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 HIP1RO75146 1068 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 XKR3Q5GH77 459 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 FAM114A1Q8IWE2 563 aa19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 MAGEC2Q9UBF1 373 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-224ENST00000600718 KCNJ18B7U540 433 aa19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 TPM2P07951 284 aa19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 TXNP10599 105 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 EEF1GP26641 437 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 KCNJ12Q14500 433 aa19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 FILIP1LQ4L180 1135 aa19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 APTXQ7Z2E3 356 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 IRF2BP1Q8IU81 584 aa19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 DHX37Q8IY37 1157 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 MAML3Q96JK9 1138 aa19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 POLD4Q9HCU8 107 aa19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 IMPACTQ9P2X3 320 aa19.52■□□□□ 0.72
SHKBP1-224ENST00000600718 A0A1B0GTH6 734 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 RBM47A0AV96 593 aaKnown RBP19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 USO1O60763 962 aaKnown RBP19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 NPEPPSP55786 919 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 PRKCEQ02156 737 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 MAPK7Q13164 816 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 NR1I3Q14994 352 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 MORN1Q5T089 497 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 FAM160B1Q5W0V3 765 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 PLA2G4FQ68DD2 849 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 MSL3Q8N5Y2 521 aaKnown RBP19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 ZNF507Q8TCN5 953 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 CEP170P1Q96L14 293 aa19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.52■□□□□ 0.71
SHKBP1-224ENST00000600718 TMEM150BA6NC51 233 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 EIF3DO15371 548 aaKnown RBP eCLIP19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 KRT31Q15323 416 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 BMT2Q1RMZ1 405 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 ZCWPW2Q504Y3 356 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 TAPT1Q6NXT6 567 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 STXBP4Q6ZWJ1 553 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 DAW1Q8N136 415 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 AFAP1L1Q8TED9 768 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 KCTD10Q9H3F6 313 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 PDGFCQ9NRA1 345 aa19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 LARSQ9P2J5 1176 aaKnown RBP19.51■□□□□ 0.71
SHKBP1-224ENST00000600718 GCNT3O95395 438 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 MAPTP10636 758 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 CASP5P51878 434 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 KNOP1Q1ED39 458 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 ODR4Q5SWX8 454 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 PPP4R3CPQ6ZMV5 832 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 TRMT1LQ7Z2T5 733 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 NELFCDQ8IXH7 590 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 FAM178BQ8IXR5 827 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 DRC1Q96MC2 740 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 GPR20Q99678 358 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 INTS13Q9NVM9 706 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 CA12O43570 354 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 SNAI1O95863 264 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 MYBP10242 640 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 STAT5BP51692 787 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 MAP2K5Q13163 448 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 PAXIP1Q6ZW49 1069 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 ZNF720Q7Z2F6 126 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 CCDC186Q7Z3E2 898 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 NPLOC4Q8TAT6 608 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 PCYT2Q99447 389 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 TINF2Q9BSI4 451 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 NRBP2Q9NSY0 501 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 SEPT9Q9UHD8 586 aaPredicted RBP19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 NRBP1Q9UHY1 535 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 DOCK5Q9H7D0 1870 aa19.5■□□□□ 0.71
SHKBP1-224ENST00000600718 ZNF236Q9UL36 1845 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 NOP56O00567 594 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 OATP04181 439 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 PLS3P13797 630 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 ATP4AP20648 1035 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 TCF7P36402 384 aaPredicted RBP19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 COPB1P53618 953 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 FKBP3Q00688 224 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 CRHR2Q13324 411 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 CYP4F22Q6NT55 531 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 MAEAQ7L5Y9 396 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 TMC6Q7Z403 805 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 CREBRFQ8IUR6 639 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 VSTM4Q8IW00 320 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 SPATA33Q96N06 139 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 FIZ1Q96SL8 496 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 SH2D3AQ9BRG2 576 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 NIFKQ9BYG3 293 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 KATNBL1Q9H079 304 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 AZI2Q9H6S1 392 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 CYP26B1Q9NR63 512 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 PCDHB13Q9Y5F0 798 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 UBE4BO95155 1302 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 PLXNA1Q9UIW2 1896 aa19.49■□□□□ 0.71
SHKBP1-224ENST00000600718 DGAT1O75907 488 aa19.48■□□□□ 0.71
SHKBP1-224ENST00000600718 PRPF6O94906 941 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-224ENST00000600718 ALDH1A1P00352 501 aa19.48■□□□□ 0.71
SHKBP1-224ENST00000600718 NMT1P30419 496 aaKnown RBP19.48■□□□□ 0.71
SHKBP1-224ENST00000600718 NOGQ13253 232 aa19.48■□□□□ 0.71
SHKBP1-224ENST00000600718 LAMC2Q13753 1193 aa19.48■□□□□ 0.71
SHKBP1-224ENST00000600718 EDRF1Q3B7T1 1238 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms