RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 XKR9Q5GH70 373 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 ADALQ6DHV7 355 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 ANKRD33Q7Z3H0 272 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 RSPH3Q86UC2 560 aa18.64■□□□□ 0.57
USHBP1-210ENST00000600286 DDX19AQ9NUU7 478 aaKnown RBP18.64■□□□□ 0.57
USHBP1-210ENST00000600286 ARHGEF35A5YM69 484 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 EVI5O60447 810 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 DNM2P50570 870 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 GRIN1Q05586 938 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 MTERF2Q49AM1 385 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 SPECC1Q5M775 1068 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 RRAGBQ5VZM2 374 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 CHRDL2Q6WN34 429 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 CCDC73Q6ZRK6 1079 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 SLC7A3Q8WY07 619 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 SYMPKQ92797 1274 aaKnown RBP18.63■□□□□ 0.57
USHBP1-210ENST00000600286 GBP4Q96PP9 640 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 CYP26B1Q9NR63 512 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 TUBE1Q9UJT0 475 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 DBR1Q9UK59 544 aaKnown RBP18.63■□□□□ 0.57
USHBP1-210ENST00000600286 DOCK5Q9H7D0 1870 aa18.63■□□□□ 0.57
USHBP1-210ENST00000600286 KLRC1P26715 233 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 RFC5P40937 340 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 POLGP54098 1239 aaPredicted RBP18.62■□□□□ 0.57
USHBP1-210ENST00000600286 PTK7Q13308 1070 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 HYIQ5T013 277 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 GDF6Q6KF10 455 aaPredicted RBP18.62■□□□□ 0.57
USHBP1-210ENST00000600286 TAF2Q6P1X5 1199 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 POTEGQ6S5H5 508 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 ANO5Q75V66 913 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 PIGOQ8TEQ8 1089 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 LMBR1Q8WVP7 490 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 EPSTI1Q96J88 318 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 TMEM39AQ9NV64 488 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 NR2E3Q9Y5X4 410 aa18.62■□□□□ 0.57
USHBP1-210ENST00000600286 GOLGA6L22H0YM25 854 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 B4GALT4O60513 344 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 EYA4O95677 639 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 CLTBP09497 229 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 CYP2C9P11712 490 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 BFSP2Q13515 415 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 MTHFD1LQ6UB35 978 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 FAM126BQ8IXS8 530 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 METTL13Q8N6R0 699 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 PPP1R13LQ8WUF5 828 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 MMTAG2Q9BU76 263 aaKnown RBP18.61■□□□□ 0.57
USHBP1-210ENST00000600286 TRPV6Q9H1D0 765 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 GDPD2Q9HCC8 539 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 TRMT13Q9NUP7 481 aaKnown RBP18.61■□□□□ 0.57
USHBP1-210ENST00000600286 WRAP73Q9P2S5 460 aaPredicted RBP18.61■□□□□ 0.57
USHBP1-210ENST00000600286 PCDHA2Q9Y5H9 948 aa18.61■□□□□ 0.57
USHBP1-210ENST00000600286 LAMA2P24043 3122 aaKnown RBP18.6■□□□□ 0.57
USHBP1-210ENST00000600286 TREHO43280 583 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 GAS2O43903 313 aaKnown RBP18.6■□□□□ 0.57
USHBP1-210ENST00000600286 DGAT1O75907 488 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 SSBP05455 408 aaKnown RBP eCLIP18.6■□□□□ 0.57
USHBP1-210ENST00000600286 CMA1P23946 247 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 KARSQ15046 597 aaKnown RBP18.6■□□□□ 0.57
USHBP1-210ENST00000600286 AXDND1Q5T1B0 1012 aaPredicted RBP18.6■□□□□ 0.57
USHBP1-210ENST00000600286 PLA2G4FQ68DD2 849 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 NME8Q8N427 588 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 CCDC34Q96HJ3 373 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 CHAMP1Q96JM3 812 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 MAP7D2Q96T17 732 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 PLIN2Q99541 437 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 SUGCTQ9HAC7 445 aa18.6■□□□□ 0.57
USHBP1-210ENST00000600286 SMIM35A0A1B0GVV1 85 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 A0A1W2PQ27 194 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 A0A1W2PQ64 194 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 A0A1W2PQD8 194 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 STBD1O95210 358 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 CD4P01730 458 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 PLCG1P19174 1290 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 HOXC8P31273 242 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 STAT6P42226 847 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 RARRES1P49788 294 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 NPEPPSP55786 919 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 ZNF200P98182 395 aaPredicted RBP18.59■□□□□ 0.57
USHBP1-210ENST00000600286 CDC42EP1Q00587 391 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 GRB10Q13322 594 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 TARBP2Q15633 366 aaKnown RBP18.59■□□□□ 0.57
USHBP1-210ENST00000600286 TPRNQ4KMQ1 711 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 RESP18Q5W5W9 173 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 EFCAB12Q6NXP0 572 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 ZNF710Q8N1W2 664 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 IQUBQ8NA54 791 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 CAGE1Q8TC20 777 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 TRAPPC12Q8WVT3 735 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 TCP11Q8WWU5 503 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 PANK2Q9BZ23 570 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 LRRC27Q9C0I9 530 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 PRDM5Q9NQX1 630 aaPredicted RBP18.59■□□□□ 0.57
USHBP1-210ENST00000600286 BMP2KQ9NSY1 1161 aaPredicted RBP18.59■□□□□ 0.57
USHBP1-210ENST00000600286 STK17AQ9UEE5 414 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 SCN10AQ9Y5Y9 1956 aa18.59■□□□□ 0.57
USHBP1-210ENST00000600286 MBLAC1A4D2B0 266 aaPredicted RBP18.58■□□□□ 0.56
USHBP1-210ENST00000600286 E9PMD0 336 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 M0QZ92 97 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 CAND2O75155 1236 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms