RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 MRPS6P82932 125 aaKnown RBP17.07■□□□□ 0.32
LIG1-219ENST00000600055 PTGDRQ13258 359 aa17.07■□□□□ 0.32
LIG1-219ENST00000600055 TARBP2Q15633 366 aaKnown RBP17.07■□□□□ 0.32
LIG1-219ENST00000600055 ANO5Q75V66 913 aa17.07■□□□□ 0.32
LIG1-219ENST00000600055 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
LIG1-219ENST00000600055 KIAA0319LQ8IZA0 1049 aa17.07■□□□□ 0.32
LIG1-219ENST00000600055 METTL13Q8N6R0 699 aa17.07■□□□□ 0.32
LIG1-219ENST00000600055 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
LIG1-219ENST00000600055 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.07■□□□□ 0.32
LIG1-219ENST00000600055 CEP131Q9UPN4 1083 aa17.07■□□□□ 0.32
LIG1-219ENST00000600055 ZBTB39O15060 712 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 SLITRK3O94933 977 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 GHRP10912 638 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 ACTN1P12814 892 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 PDCP20941 246 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 CLCN3P51790 818 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 NPEPPSP55786 919 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 CNKSR3Q6P9H4 555 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 TPH2Q8IWU9 490 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 LRRC71Q8N4P6 559 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 ZNF579Q8NAF0 562 aaKnown RBP17.06■□□□□ 0.32
LIG1-219ENST00000600055 SPRYD3Q8NCJ5 442 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 DBF4BQ8NFT6 615 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 CEP89Q96ST8 783 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 PPP1R16BQ96T49 567 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 HSD17B14Q9BPX1 270 aa17.06■□□□□ 0.32
LIG1-219ENST00000600055 KAT6AQ92794 2004 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 A0A087WWV3 80 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 PLEKHG4Q58EX7 1191 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 EFCAB12Q6NXP0 572 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 C4orf19Q8IY42 314 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 MTIF3Q9H2K0 278 aaKnown RBP17.05■□□□□ 0.32
LIG1-219ENST00000600055 ZSWIM4Q9H7M6 989 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 SUGCTQ9HAC7 445 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 CDHR5Q9HBB8 845 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 TRPV2Q9Y5S1 764 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 SLC4A7Q9Y6M7 1214 aa17.05■□□□□ 0.32
LIG1-219ENST00000600055 MYH9P35579 1960 aaKnown RBP17.04■□□□□ 0.32
LIG1-219ENST00000600055 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.04■□□□□ 0.32
LIG1-219ENST00000600055 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.04■□□□□ 0.32
LIG1-219ENST00000600055 MAGEB2O15479 319 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.32
LIG1-219ENST00000600055 VTNP04004 478 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 YWHABP31946 246 aaKnown RBP17.04■□□□□ 0.32
LIG1-219ENST00000600055 TBC1D8BQ0IIM8 1120 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 LPIN1Q14693 890 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 IL17AQ16552 155 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 FBXO47Q5MNV8 452 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 IER5Q5VY09 327 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 NME8Q8N427 588 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 TET1Q8NFU7 2136 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 CELF4Q9BZC1 486 aaKnown RBP17.04■□□□□ 0.32
LIG1-219ENST00000600055 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 WDR81Q562E7 1941 aa17.04■□□□□ 0.32
LIG1-219ENST00000600055 M0QZ92 97 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 MED24O75448 989 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 RPLP2P05387 115 aaKnown RBP17.03■□□□□ 0.32
LIG1-219ENST00000600055 SPATA31C1P0DKV0 1188 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 PBX2P40425 430 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 FXR2P51116 673 aaKnown RBP eCLIP17.03■□□□□ 0.32
LIG1-219ENST00000600055 SMAD3P84022 425 aaKnown RBP17.03■□□□□ 0.32
LIG1-219ENST00000600055 RESTQ13127 1097 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 MKRN4PQ13434 485 aaPredicted RBP17.03■□□□□ 0.32
LIG1-219ENST00000600055 DRP2Q13474 957 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 BRAPQ7Z569 592 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 NEK9Q8TD19 979 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 SEPT8Q92599 483 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 ZNF668Q96K58 619 aaPredicted RBP17.03■□□□□ 0.32
LIG1-219ENST00000600055 CEP170P1Q96L14 293 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 AGO3Q9H9G7 860 aaKnown RBP17.03■□□□□ 0.32
LIG1-219ENST00000600055 CYP26B1Q9NR63 512 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 AKT3Q9Y243 479 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 GINS2Q9Y248 185 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 LAMA3Q16787 3333 aa17.03■□□□□ 0.32
LIG1-219ENST00000600055 ABHD14A-ACY1A0A1B0GW23 586 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 STX6O43752 255 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 BAIAP3O94812 1187 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 LYPLA2O95372 231 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.32
LIG1-219ENST00000600055 ATP2A2P16615 1042 aaKnown RBP17.02■□□□□ 0.32
LIG1-219ENST00000600055 RABGGTBP53611 331 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 WDR5P61964 334 aaKnown RBP17.02■□□□□ 0.32
LIG1-219ENST00000600055 DEFB103AP81534 67 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 ATP2C1P98194 919 aaPredicted RBP17.02■□□□□ 0.32
LIG1-219ENST00000600055 IKBKEQ14164 716 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 KIZQ2M2Z5 673 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 TMEM266Q2M3C6 531 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 XKR9Q5GH70 373 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 FAM173BQ6P4H8 233 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
LIG1-219ENST00000600055 TMCO2Q7Z6W1 182 aaPredicted RBP17.02■□□□□ 0.32
LIG1-219ENST00000600055 CATSPER3Q86XQ3 398 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 PIGOQ8TEQ8 1089 aa17.02■□□□□ 0.32
LIG1-219ENST00000600055 IFIH1Q9BYX4 1025 aaKnown RBP17.02■□□□□ 0.32
LIG1-219ENST00000600055 BMP2KQ9NSY1 1161 aaPredicted RBP17.02■□□□□ 0.32
LIG1-219ENST00000600055 KDM3AQ9Y4C1 1321 aa17.01■□□□□ 0.31
LIG1-219ENST00000600055 IGKV6-21A0A0C4DH24 114 aa17.01■□□□□ 0.31
LIG1-219ENST00000600055 PP2D1A8MPX8 630 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms