RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 MGAT3Q09327 533 aa31.66■■■□□ 2.66
SSBP4-206ENST00000599699 XKR3Q5GH77 459 aa31.66■■■□□ 2.66
SSBP4-206ENST00000599699 TTC38Q5R3I4 469 aa31.66■■■□□ 2.66
SSBP4-206ENST00000599699 NME8Q8N427 588 aa31.66■■■□□ 2.66
SSBP4-206ENST00000599699 TIFAQ96CG3 184 aa31.66■■■□□ 2.66
SSBP4-206ENST00000599699 TTC12Q9H892 705 aaPredicted RBP31.66■■■□□ 2.66
SSBP4-206ENST00000599699 TRPV2Q9Y5S1 764 aa31.66■■■□□ 2.66
SSBP4-206ENST00000599699 MAGEB2O15479 319 aa31.65■■■□□ 2.66
SSBP4-206ENST00000599699 QARSP47897 775 aaKnown RBP31.65■■■□□ 2.66
SSBP4-206ENST00000599699 RABGGTBP53611 331 aa31.65■■■□□ 2.66
SSBP4-206ENST00000599699 WDR5P61964 334 aaKnown RBP31.65■■■□□ 2.66
SSBP4-206ENST00000599699 EPHA7Q15375 998 aa31.65■■■□□ 2.66
SSBP4-206ENST00000599699 RAB30Q15771 203 aa31.65■■■□□ 2.66
SSBP4-206ENST00000599699 IFIH1Q9BYX4 1025 aaKnown RBP31.65■■■□□ 2.66
SSBP4-206ENST00000599699 DKC1O60832 514 aaKnown RBP eCLIP31.64■■■□□ 2.66
SSBP4-206ENST00000599699 P4HBP07237 508 aaKnown RBP31.64■■■□□ 2.66
SSBP4-206ENST00000599699 TRAPPC10P48553 1259 aa31.64■■■□□ 2.66
SSBP4-206ENST00000599699 MTERF2Q49AM1 385 aa31.64■■■□□ 2.66
SSBP4-206ENST00000599699 KIAA0319LQ8IZA0 1049 aa31.64■■■□□ 2.66
SSBP4-206ENST00000599699 PHOSPHO2Q8TCD6 241 aa31.64■■■□□ 2.66
SSBP4-206ENST00000599699 MTMR9Q96QG7 549 aa31.64■■■□□ 2.66
SSBP4-206ENST00000599699 TMEM60Q9H2L4 133 aa31.64■■■□□ 2.66
SSBP4-206ENST00000599699 GINS2Q9Y248 185 aa31.64■■■□□ 2.66
SSBP4-206ENST00000599699 SPIRE1Q08AE8 756 aa31.63■■■□□ 2.65
SSBP4-206ENST00000599699 TBC1D8BQ0IIM8 1120 aa31.63■■■□□ 2.65
SSBP4-206ENST00000599699 ORC2Q13416 577 aaPredicted RBP31.63■■■□□ 2.65
SSBP4-206ENST00000599699 CUL4AQ13619 759 aa31.63■■■□□ 2.65
SSBP4-206ENST00000599699 LPIN1Q14693 890 aa31.63■■■□□ 2.65
SSBP4-206ENST00000599699 LARP1BQ659C4 914 aaKnown RBP31.63■■■□□ 2.65
SSBP4-206ENST00000599699 CELF4Q9BZC1 486 aaKnown RBP31.63■■■□□ 2.65
SSBP4-206ENST00000599699 TMEM150BA6NC51 233 aa31.62■■■□□ 2.65
SSBP4-206ENST00000599699 TMOD1P28289 359 aa31.62■■■□□ 2.65
SSBP4-206ENST00000599699 FBXO47Q5MNV8 452 aa31.62■■■□□ 2.65
SSBP4-206ENST00000599699 EFCAB12Q6NXP0 572 aa31.62■■■□□ 2.65
SSBP4-206ENST00000599699 APBB2Q92870 758 aa31.62■■■□□ 2.65
SSBP4-206ENST00000599699 DYDC2Q96IM9 177 aa31.62■■■□□ 2.65
SSBP4-206ENST00000599699 NIFKQ9BYG3 293 aaKnown RBP31.62■■■□□ 2.65
SSBP4-206ENST00000599699 SUGCTQ9HAC7 445 aa31.62■■■□□ 2.65
SSBP4-206ENST00000599699 RGL1Q9NZL6 768 aa31.62■■■□□ 2.65
SSBP4-206ENST00000599699 CLCN3P51790 818 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 DEFB103AP81534 67 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 CYP4A11Q02928 519 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 HERC6Q8IVU3 1022 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 MAP7D2Q96T17 732 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 PPP1R16BQ96T49 567 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 SH2D3AQ9BRG2 576 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 LXNQ9BS40 222 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 SEMA6BQ9H3T3 888 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 AKT3Q9Y243 479 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 PCDHA11Q9Y5I1 949 aa31.61■■■□□ 2.65
SSBP4-206ENST00000599699 STBD1O95210 358 aa31.6■■■□□ 2.65
SSBP4-206ENST00000599699 OR52Z1P0C646 297 aa31.6■■■□□ 2.65
SSBP4-206ENST00000599699 NBR1Q14596 966 aa31.6■■■□□ 2.65
SSBP4-206ENST00000599699 TSHZ1Q6ZSZ6 1077 aa31.6■■■□□ 2.65
SSBP4-206ENST00000599699 LRRC71Q8N4P6 559 aa31.6■■■□□ 2.65
SSBP4-206ENST00000599699 ZBED2Q9BTP6 218 aa31.6■■■□□ 2.65
SSBP4-206ENST00000599699 NKX2-4Q9H2Z4 354 aa31.6■■■□□ 2.65
SSBP4-206ENST00000599699 MTMR10Q9NXD2 777 aa31.6■■■□□ 2.65
SSBP4-206ENST00000599699 YBX2Q9Y2T7 364 aaKnown RBP31.6■■■□□ 2.65
SSBP4-206ENST00000599699 TMEM265A0A087WTH1 108 aa31.59■■■□□ 2.65
SSBP4-206ENST00000599699 AMHP03971 560 aa31.59■■■□□ 2.65
SSBP4-206ENST00000599699 VTNP04004 478 aa31.59■■■□□ 2.65
SSBP4-206ENST00000599699 MYOGP15173 224 aa31.59■■■□□ 2.65
SSBP4-206ENST00000599699 CTTNQ14247 550 aaKnown RBP31.59■■■□□ 2.65
SSBP4-206ENST00000599699 TARBP2Q15633 366 aaKnown RBP31.59■■■□□ 2.65
SSBP4-206ENST00000599699 PLA2G4FQ68DD2 849 aa31.59■■■□□ 2.65
SSBP4-206ENST00000599699 TMCO2Q7Z6W1 182 aaPredicted RBP31.59■■■□□ 2.65
SSBP4-206ENST00000599699 TPH2Q8IWU9 490 aa31.59■■■□□ 2.65
SSBP4-206ENST00000599699 EIF2AK1Q9BQI3 630 aaKnown RBP31.59■■■□□ 2.65
SSBP4-206ENST00000599699 TTYH1Q9H313 450 aaPredicted RBP31.59■■■□□ 2.65
SSBP4-206ENST00000599699 ZSWIM4Q9H7M6 989 aa31.59■■■□□ 2.65
SSBP4-206ENST00000599699 WDR81Q562E7 1941 aa31.58■■■□□ 2.65
SSBP4-206ENST00000599699 K7ELQ4 463 aaPredicted RBP31.58■■■□□ 2.65
SSBP4-206ENST00000599699 CD52P31358 61 aa31.58■■■□□ 2.65
SSBP4-206ENST00000599699 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.58■■■□□ 2.65
SSBP4-206ENST00000599699 ANO5Q75V66 913 aa31.58■■■□□ 2.65
SSBP4-206ENST00000599699 USP38Q8NB14 1042 aa31.58■■■□□ 2.65
SSBP4-206ENST00000599699 SLC28A3Q9HAS3 691 aa31.58■■■□□ 2.65
SSBP4-206ENST00000599699 WRAP73Q9P2S5 460 aaPredicted RBP31.58■■■□□ 2.65
SSBP4-206ENST00000599699 TECP42680 631 aa31.57■■■□□ 2.64
SSBP4-206ENST00000599699 TOB1P50616 345 aaPredicted RBP31.57■■■□□ 2.64
SSBP4-206ENST00000599699 KIZQ2M2Z5 673 aa31.57■■■□□ 2.64
SSBP4-206ENST00000599699 FAM117BQ6P1L5 589 aa31.57■■■□□ 2.64
SSBP4-206ENST00000599699 C4orf19Q8IY42 314 aa31.57■■■□□ 2.64
SSBP4-206ENST00000599699 MYOCDQ8IZQ8 938 aa31.57■■■□□ 2.64
SSBP4-206ENST00000599699 ZNF576Q9H609 170 aa31.57■■■□□ 2.64
SSBP4-206ENST00000599699 AGO3Q9H9G7 860 aaKnown RBP31.57■■■□□ 2.64
SSBP4-206ENST00000599699 SQORQ9Y6N5 450 aa31.57■■■□□ 2.64
SSBP4-206ENST00000599699 KDM3AQ9Y4C1 1321 aa31.56■■■□□ 2.64
SSBP4-206ENST00000599699 POTEMA6NI47 508 aa31.56■■■□□ 2.64
SSBP4-206ENST00000599699 TLL1O43897 1013 aa31.56■■■□□ 2.64
SSBP4-206ENST00000599699 PAK2Q13177 524 aa31.56■■■□□ 2.64
SSBP4-206ENST00000599699 OTUD6AQ7L8S5 288 aa31.56■■■□□ 2.64
SSBP4-206ENST00000599699 CEP170P1Q96L14 293 aa31.56■■■□□ 2.64
SSBP4-206ENST00000599699 PCDHB6Q9Y5E3 794 aa31.56■■■□□ 2.64
SSBP4-206ENST00000599699 YWHABP31946 246 aaKnown RBP31.55■■■□□ 2.64
SSBP4-206ENST00000599699 DNM2P50570 870 aa31.55■■■□□ 2.64
SSBP4-206ENST00000599699 NPEPPSP55786 919 aa31.55■■■□□ 2.64
SSBP4-206ENST00000599699 TMEM266Q2M3C6 531 aa31.55■■■□□ 2.64
SSBP4-206ENST00000599699 NEK9Q8TD19 979 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms