RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 TARBP2Q15633 366 aaKnown RBP25.63■■□□□ 1.69
IRF3-220ENST00000598108 FBXO47Q5MNV8 452 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 ZNF697Q5TEC3 545 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 IER5Q5VY09 327 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 NCAPH2Q6IBW4 605 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.63■■□□□ 1.69
IRF3-220ENST00000598108 NME8Q8N427 588 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 PHOSPHO2Q8TCD6 241 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 SEPT8Q92599 483 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 CEP89Q96ST8 783 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 NIFKQ9BYG3 293 aaKnown RBP25.63■■□□□ 1.69
IRF3-220ENST00000598108 RGL1Q9NZL6 768 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 PCDHA12Q9UN75 941 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 CEP131Q9UPN4 1083 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 KIF3AQ9Y496 699 aa25.63■■□□□ 1.69
IRF3-220ENST00000598108 DDX11L8A8MPP1 907 aa25.62■■□□□ 1.69
IRF3-220ENST00000598108 RPLP2P05387 115 aaKnown RBP25.62■■□□□ 1.69
IRF3-220ENST00000598108 TOB1P50616 345 aaPredicted RBP25.62■■□□□ 1.69
IRF3-220ENST00000598108 NBR1Q14596 966 aa25.62■■□□□ 1.69
IRF3-220ENST00000598108 XKR3Q5GH77 459 aa25.62■■□□□ 1.69
IRF3-220ENST00000598108 HERC6Q8IVU3 1022 aa25.62■■□□□ 1.69
IRF3-220ENST00000598108 METTL13Q8N6R0 699 aa25.62■■□□□ 1.69
IRF3-220ENST00000598108 SLC9A7Q96T83 725 aa25.62■■□□□ 1.69
IRF3-220ENST00000598108 SH2D3AQ9BRG2 576 aa25.62■■□□□ 1.69
IRF3-220ENST00000598108 CELF4Q9BZC1 486 aaKnown RBP25.62■■□□□ 1.69
IRF3-220ENST00000598108 TTC12Q9H892 705 aaPredicted RBP25.62■■□□□ 1.69
IRF3-220ENST00000598108 AGO3Q9H9G7 860 aaKnown RBP25.62■■□□□ 1.69
IRF3-220ENST00000598108 CDHR5Q9HBB8 845 aa25.62■■□□□ 1.69
IRF3-220ENST00000598108 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.62■■□□□ 1.69
IRF3-220ENST00000598108 TRPV2Q9Y5S1 764 aa25.62■■□□□ 1.69
IRF3-220ENST00000598108 KAT6AQ92794 2004 aa25.61■■□□□ 1.69
IRF3-220ENST00000598108 P4HBP07237 508 aaKnown RBP25.61■■□□□ 1.69
IRF3-220ENST00000598108 QARSP47897 775 aaKnown RBP25.61■■□□□ 1.69
IRF3-220ENST00000598108 KCNJ6P48051 423 aa25.61■■□□□ 1.69
IRF3-220ENST00000598108 CLCN3P51790 818 aa25.61■■□□□ 1.69
IRF3-220ENST00000598108 TTC38Q5R3I4 469 aa25.61■■□□□ 1.69
IRF3-220ENST00000598108 ANO5Q75V66 913 aa25.61■■□□□ 1.69
IRF3-220ENST00000598108 LINC01465Q8N7H1 131 aa25.61■■□□□ 1.69
IRF3-220ENST00000598108 GUCD1Q96NT3 240 aa25.61■■□□□ 1.69
IRF3-220ENST00000598108 IFIH1Q9BYX4 1025 aaKnown RBP25.61■■□□□ 1.69
IRF3-220ENST00000598108 NKX2-4Q9H2Z4 354 aa25.61■■□□□ 1.69
IRF3-220ENST00000598108 SEPT9Q9UHD8 586 aaPredicted RBP25.61■■□□□ 1.69
IRF3-220ENST00000598108 MSRAQ9UJ68 235 aa25.61■■□□□ 1.69
IRF3-220ENST00000598108 MAGEB2O15479 319 aa25.6■■□□□ 1.69
IRF3-220ENST00000598108 RAB30Q15771 203 aa25.6■■□□□ 1.69
IRF3-220ENST00000598108 EFCAB12Q6NXP0 572 aa25.6■■□□□ 1.69
IRF3-220ENST00000598108 LRRC71Q8N4P6 559 aa25.6■■□□□ 1.69
IRF3-220ENST00000598108 DYDC2Q96IM9 177 aa25.6■■□□□ 1.69
IRF3-220ENST00000598108 PCDHA11Q9Y5I1 949 aa25.6■■□□□ 1.69
IRF3-220ENST00000598108 EFCAB14O75071 495 aa25.59■■□□□ 1.69
IRF3-220ENST00000598108 VTNP04004 478 aa25.59■■□□□ 1.69
IRF3-220ENST00000598108 TRAPPC10P48553 1259 aa25.59■■□□□ 1.69
IRF3-220ENST00000598108 CTTNQ14247 550 aaKnown RBP25.59■■□□□ 1.69
IRF3-220ENST00000598108 MTERF2Q49AM1 385 aa25.59■■□□□ 1.69
IRF3-220ENST00000598108 MCTP1Q6DN14 999 aa25.59■■□□□ 1.69
IRF3-220ENST00000598108 C4orf32Q8N8J7 132 aa25.59■■□□□ 1.69
IRF3-220ENST00000598108 ZNF579Q8NAF0 562 aaKnown RBP25.59■■□□□ 1.69
IRF3-220ENST00000598108 PPP1R16BQ96T49 567 aa25.59■■□□□ 1.69
IRF3-220ENST00000598108 ZNF576Q9H609 170 aa25.59■■□□□ 1.69
IRF3-220ENST00000598108 TMEM265A0A087WTH1 108 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.58■■□□□ 1.69
IRF3-220ENST00000598108 M0QZ92 97 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 SLITRK3O94933 977 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 CD52P31358 61 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 CYP4A11Q02928 519 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 PLA2G4FQ68DD2 849 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 TSHZ1Q6ZSZ6 1077 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 HSD17B14Q9BPX1 270 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 EIF2AK1Q9BQI3 630 aaKnown RBP25.58■■□□□ 1.69
IRF3-220ENST00000598108 LXNQ9BS40 222 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 SUGCTQ9HAC7 445 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 GINS2Q9Y248 185 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 KDM3AQ9Y4C1 1321 aa25.58■■□□□ 1.69
IRF3-220ENST00000598108 H3BQV1 296 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 ZBTB39O15060 712 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 GPR32O75388 356 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 NPEPPSP55786 919 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 TBC1D8BQ0IIM8 1120 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 DRP2Q13474 957 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 GRIN2CQ14957 1233 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 KIZQ2M2Z5 673 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 LARP1BQ659C4 914 aaKnown RBP25.57■■□□□ 1.68
IRF3-220ENST00000598108 C4orf19Q8IY42 314 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 TMEM40Q8WWA1 233 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 APBB2Q92870 758 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 NOL7Q9UMY1 257 aaKnown RBP25.57■■□□□ 1.68
IRF3-220ENST00000598108 PCDHB6Q9Y5E3 794 aa25.57■■□□□ 1.68
IRF3-220ENST00000598108 POTEMA6NI47 508 aa25.56■■□□□ 1.68
IRF3-220ENST00000598108 ARHGEF15O94989 841 aa25.56■■□□□ 1.68
IRF3-220ENST00000598108 OR52Z1P0C646 297 aa25.56■■□□□ 1.68
IRF3-220ENST00000598108 ORC2Q13416 577 aaPredicted RBP25.56■■□□□ 1.68
IRF3-220ENST00000598108 TPH2Q8IWU9 490 aa25.56■■□□□ 1.68
IRF3-220ENST00000598108 CDX2Q99626 313 aaPredicted RBP25.56■■□□□ 1.68
IRF3-220ENST00000598108 ZSWIM4Q9H7M6 989 aa25.56■■□□□ 1.68
IRF3-220ENST00000598108 SQORQ9Y6N5 450 aa25.56■■□□□ 1.68
IRF3-220ENST00000598108 CHD9Q3L8U1 2897 aa25.56■■□□□ 1.68
IRF3-220ENST00000598108 IGKV6-21A0A0C4DH24 114 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 CA3P07451 260 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 TECP42680 631 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 TMEM266Q2M3C6 531 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms