RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 TRAPPC12Q8WVT3 735 aa19.34■□□□□ 0.69
PNKP-210ENST00000597965 ZNF302Q9NR11 478 aa19.34■□□□□ 0.69
PNKP-210ENST00000597965 TBC1D22BQ9NU19 505 aa19.34■□□□□ 0.69
PNKP-210ENST00000597965 CEP131Q9UPN4 1083 aa19.34■□□□□ 0.69
PNKP-210ENST00000597965 GINS2Q9Y248 185 aa19.34■□□□□ 0.69
PNKP-210ENST00000597965 FGD1P98174 961 aa19.33■□□□□ 0.68
PNKP-210ENST00000597965 COASYQ13057 564 aa19.33■□□□□ 0.68
PNKP-210ENST00000597965 CAMK1Q14012 370 aa19.33■□□□□ 0.68
PNKP-210ENST00000597965 TSGA10IPQ3SY00 556 aa19.33■□□□□ 0.68
PNKP-210ENST00000597965 HERC4Q5GLZ8 1057 aaPredicted RBP19.33■□□□□ 0.68
PNKP-210ENST00000597965 BMP2KLQ5H9B9 411 aa19.33■□□□□ 0.68
PNKP-210ENST00000597965 ABHD15Q6UXT9 468 aa19.33■□□□□ 0.68
PNKP-210ENST00000597965 POF1BQ8WVV4 589 aa19.33■□□□□ 0.68
PNKP-210ENST00000597965 ZBTB10Q96DT7 871 aa19.33■□□□□ 0.68
PNKP-210ENST00000597965 PIEZO1Q92508 2521 aa19.33■□□□□ 0.68
PNKP-210ENST00000597965 GOLGA8AA7E2F4 631 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 GOLGA8BA8MQT2 603 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 IPO5O00410 1097 aaKnown RBP19.32■□□□□ 0.68
PNKP-210ENST00000597965 SRGAP2BP0DMP2 458 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 CLK2P49760 499 aaKnown RBP19.32■□□□□ 0.68
PNKP-210ENST00000597965 EXOSC10Q01780 885 aaKnown RBP19.32■□□□□ 0.68
PNKP-210ENST00000597965 PLA2G4DQ86XP0 818 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 CKAP2LQ8IYA6 745 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 SMAP1Q8IYB5 467 aaPredicted RBP19.32■□□□□ 0.68
PNKP-210ENST00000597965 SMRP1Q8NCR6 262 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 MICAL1Q8TDZ2 1067 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 BBXQ8WY36 941 aaPredicted RBP19.32■□□□□ 0.68
PNKP-210ENST00000597965 PGBD1Q96JS3 809 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 MSLNLQ96KJ4 702 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 CDCA3Q99618 268 aaPredicted RBP19.32■□□□□ 0.68
PNKP-210ENST00000597965 RGS18Q9NS28 235 aa19.32■□□□□ 0.68
PNKP-210ENST00000597965 KIAA1671Q9BY89 1806 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 DDX39AO00148 427 aaKnown RBP19.31■□□□□ 0.68
PNKP-210ENST00000597965 CSPG5O95196 566 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 CYP3A4P08684 503 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 NRIP1P48552 1158 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 CRYBB1P53674 252 aaPredicted RBP19.31■□□□□ 0.68
PNKP-210ENST00000597965 FUT2Q10981 343 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 PKN1Q16512 942 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 TYW1BQ6NUM6 668 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 ZNF746Q6NUN9 644 aaPredicted RBP19.31■□□□□ 0.68
PNKP-210ENST00000597965 RNF135Q8IUD6 432 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 KIAA0319LQ8IZA0 1049 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 ADAM2Q99965 735 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 ZNF577Q9BSK1 485 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 TMX1Q9H3N1 280 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 TLE6Q9H808 572 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 C6orf50Q9HD87 102 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 ERVK-5Q9HDB9 667 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 TLR9Q9NR96 1032 aa19.31■□□□□ 0.68
PNKP-210ENST00000597965 KLF18A0A0U1RQI7 1052 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 ESYT2A0FGR8 921 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 LINC01565O15544 149 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 HOXA2O43364 376 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 CCNE2O96020 404 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 GNA11P29992 359 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 GTF2F1P35269 517 aaKnown RBP eCLIP19.3■□□□□ 0.68
PNKP-210ENST00000597965 PFKFB3Q16875 520 aaPredicted RBP19.3■□□□□ 0.68
PNKP-210ENST00000597965 TMEM266Q2M3C6 531 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 SWSAP1Q6NVH7 229 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 CCDC60Q8IWA6 550 aaPredicted RBP19.3■□□□□ 0.68
PNKP-210ENST00000597965 FAM167AQ96KS9 214 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 ELAC1Q9H777 363 aaKnown RBP19.3■□□□□ 0.68
PNKP-210ENST00000597965 ATP6V0A4Q9HBG4 840 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 TMEM161AQ9NX61 479 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 PUF60Q9UHX1 559 aaKnown RBP19.3■□□□□ 0.68
PNKP-210ENST00000597965 BRPF3Q9ULD4 1205 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 ST3GAL5Q9UNP4 418 aa19.3■□□□□ 0.68
PNKP-210ENST00000597965 MYH9P35579 1960 aaKnown RBP19.3■□□□□ 0.68
PNKP-210ENST00000597965 TBKBP1A7MCY6 615 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 FAM86B1E9PN63 330 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 MAGEB2O15479 319 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 PSAPP07602 524 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 FAM86B2P0C5J1 330 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 DNAJB1P25685 340 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 TMOD1P28289 359 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 IRX6P78412 446 aaPredicted RBP19.29■□□□□ 0.68
PNKP-210ENST00000597965 COL9A3Q14050 684 aaPredicted RBP19.29■□□□□ 0.68
PNKP-210ENST00000597965 REXO1Q8N1G1 1221 aaKnown RBP19.29■□□□□ 0.68
PNKP-210ENST00000597965 BICD2Q8TD16 824 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 EDAQ92838 391 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 TMEM260Q9NX78 707 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 MUTYHQ9UIF7 546 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 NAP1L2Q9ULW6 460 aaPredicted RBP19.29■□□□□ 0.68
PNKP-210ENST00000597965 NOC2LQ9Y3T9 749 aaKnown RBP19.29■□□□□ 0.68
PNKP-210ENST00000597965 PCDHA10Q9Y5I2 948 aa19.29■□□□□ 0.68
PNKP-210ENST00000597965 MAFBQ9Y5Q3 323 aaPredicted RBP19.29■□□□□ 0.68
PNKP-210ENST00000597965 C9IYK1 514 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 DHX15O43143 795 aaKnown RBP19.28■□□□□ 0.68
PNKP-210ENST00000597965 PPFIA3O75145 1194 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 LAG3P18627 525 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 METAP2P50579 478 aaKnown RBP eCLIP19.28■□□□□ 0.68
PNKP-210ENST00000597965 JAKMIP3Q5VZ66 844 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 RBM23Q86U06 439 aaKnown RBP19.28■□□□□ 0.68
PNKP-210ENST00000597965 THNSL1Q8IYQ7 743 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 METTL13Q8N6R0 699 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 MAP7D2Q96T17 732 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 PRRX2Q99811 253 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 ZMYND12Q9H0C1 365 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 CLEC1BQ9P126 229 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms