RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CHMP2AO43633 222 aa17.02■□□□□ 0.32
LIG1-215ENST00000597901 ZNF862O60290 1169 aa17.02■□□□□ 0.32
LIG1-215ENST00000597901 C22orf31O95567 290 aa17.02■□□□□ 0.32
LIG1-215ENST00000597901 SFNP31947 248 aa17.02■□□□□ 0.32
LIG1-215ENST00000597901 MRPS5P82675 430 aaKnown RBP17.02■□□□□ 0.32
LIG1-215ENST00000597901 SKIV2LQ15477 1246 aaKnown RBP17.02■□□□□ 0.32
LIG1-215ENST00000597901 OXER1Q8TDS5 423 aa17.02■□□□□ 0.32
LIG1-215ENST00000597901 FTHL17Q9BXU8 183 aa17.02■□□□□ 0.32
LIG1-215ENST00000597901 CCDC194A0A1B0GVG4 234 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 MAGEB2O15479 319 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 LARGE1O95461 756 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 JAK3P52333 1124 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 LETM2Q2VYF4 491 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 B3GNT9Q6UX72 402 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 METTL13Q8N6R0 699 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 FBXO22Q8NEZ5 403 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 GDPD5Q8WTR4 605 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 WASF1Q92558 559 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 FAM167AQ96KS9 214 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 ASB2Q96Q27 587 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 DDX25Q9UHL0 483 aaKnown RBP17.01■□□□□ 0.31
LIG1-215ENST00000597901 CEP131Q9UPN4 1083 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 GINS2Q9Y248 185 aa17.01■□□□□ 0.31
LIG1-215ENST00000597901 NOC2LQ9Y3T9 749 aaKnown RBP17.01■□□□□ 0.31
LIG1-215ENST00000597901 A0A0C4DFX4 3053 aa17■□□□□ 0.31
LIG1-215ENST00000597901 OATP04181 439 aa17■□□□□ 0.31
LIG1-215ENST00000597901 NFX1Q12986 1120 aaKnown RBP17■□□□□ 0.31
LIG1-215ENST00000597901 PAK2Q13177 524 aa17■□□□□ 0.31
LIG1-215ENST00000597901 MYO9BQ13459 2157 aa17■□□□□ 0.31
LIG1-215ENST00000597901 AAK1Q2M2I8 961 aa17■□□□□ 0.31
LIG1-215ENST00000597901 TMEM266Q2M3C6 531 aa17■□□□□ 0.31
LIG1-215ENST00000597901 EPC2Q52LR7 807 aa17■□□□□ 0.31
LIG1-215ENST00000597901 EFCAB12Q6NXP0 572 aa17■□□□□ 0.31
LIG1-215ENST00000597901 MIER3Q7Z3K6 550 aa17■□□□□ 0.31
LIG1-215ENST00000597901 TMEM192Q8IY95 271 aa17■□□□□ 0.31
LIG1-215ENST00000597901 FIBCD1Q8N539 461 aa17■□□□□ 0.31
LIG1-215ENST00000597901 RDM1Q8NG50 284 aa17■□□□□ 0.31
LIG1-215ENST00000597901 ETNPPLQ8TBG4 499 aa17■□□□□ 0.31
LIG1-215ENST00000597901 LINC01599Q8WXQ3 324 aa17■□□□□ 0.31
LIG1-215ENST00000597901 GTF3C6Q969F1 213 aa17■□□□□ 0.31
LIG1-215ENST00000597901 SAMD11Q96NU1 681 aa17■□□□□ 0.31
LIG1-215ENST00000597901 TMX1Q9H3N1 280 aa17■□□□□ 0.31
LIG1-215ENST00000597901 GPR32O75388 356 aa16.99■□□□□ 0.31
LIG1-215ENST00000597901 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
LIG1-215ENST00000597901 CRYBB1P53674 252 aaPredicted RBP16.99■□□□□ 0.31
LIG1-215ENST00000597901 UGCGQ16739 394 aa16.99■□□□□ 0.31
LIG1-215ENST00000597901 PPP4R3AQ6IN85 833 aa16.99■□□□□ 0.31
LIG1-215ENST00000597901 FAM43BQ6ZT52 329 aaPredicted RBP16.99■□□□□ 0.31
LIG1-215ENST00000597901 PIK3AP1Q6ZUJ8 805 aa16.99■□□□□ 0.31
LIG1-215ENST00000597901 NEK8Q86SG6 692 aa16.99■□□□□ 0.31
LIG1-215ENST00000597901 CRIPAKQ8N1N5 446 aa16.99■□□□□ 0.31
LIG1-215ENST00000597901 NSUN7Q8NE18 718 aaKnown RBP16.99■□□□□ 0.31
LIG1-215ENST00000597901 ZNF689Q96CS4 500 aaPredicted RBP16.99■□□□□ 0.31
LIG1-215ENST00000597901 ERVK-5Q9HDB9 667 aa16.99■□□□□ 0.31
LIG1-215ENST00000597901 KAT6AQ92794 2004 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 H3BNC9 293 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 SLC37A4O43826 429 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 DGKIO75912 1065 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 STBD1O95210 358 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 VTNP04004 478 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 PRKCEQ02156 737 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 GPM6BQ13491 265 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 KIZQ2M2Z5 673 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 EARS2Q5JPH6 523 aaKnown RBP16.98■□□□□ 0.31
LIG1-215ENST00000597901 TMEM40Q8WWA1 233 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 FAM20AQ96MK3 541 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 PPP1R16BQ96T49 567 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 NIFKQ9BYG3 293 aaKnown RBP16.98■□□□□ 0.31
LIG1-215ENST00000597901 ST3GAL5Q9UNP4 418 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 PTPRSQ13332 1948 aa16.98■□□□□ 0.31
LIG1-215ENST00000597901 TNFRSF10AO00220 468 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 GPR182O15218 404 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 CCNT1O60563 726 aaKnown RBP16.97■□□□□ 0.31
LIG1-215ENST00000597901 GCFC2P16383 781 aaKnown RBP16.97■□□□□ 0.31
LIG1-215ENST00000597901 TMOD1P28289 359 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 BMPR1AP36894 532 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 CLCN3P51790 818 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 NLRP11P59045 1033 aaKnown RBP16.97■□□□□ 0.31
LIG1-215ENST00000597901 TFF2Q03403 129 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 TARBP2Q15633 366 aaKnown RBP16.97■□□□□ 0.31
LIG1-215ENST00000597901 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 ODR4Q5SWX8 454 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 LRRC71Q8N4P6 559 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 LINC01465Q8N7H1 131 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 NAP1L4Q99733 375 aaKnown RBP16.97■□□□□ 0.31
LIG1-215ENST00000597901 RC3H2Q9HBD1 1191 aaKnown RBP16.97■□□□□ 0.31
LIG1-215ENST00000597901 KCNMB3Q9NPA1 279 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 COG5Q9UP83 839 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 CHD7Q9P2D1 2997 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 UNC80Q8N2C7 3258 aa16.97■□□□□ 0.31
LIG1-215ENST00000597901 DDX11L8A8MPP1 907 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 EML1O00423 815 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 MGEA5O60502 916 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 JAK2O60674 1132 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 RB1P06400 928 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 STAG3L1P0CL83 205 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 KRT2P35908 639 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 NR5A1Q13285 461 aa16.96■□□□□ 0.31
LIG1-215ENST00000597901 BTG3Q14201 252 aaPredicted RBP16.96■□□□□ 0.31
LIG1-215ENST00000597901 NPAS4Q8IUM7 802 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms