RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 NFASCO94856 1347 aa18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 CCDC69A6NI79 296 aa18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 TMTC3Q6ZXV5 915 aa18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 TMTC2Q8N394 836 aa18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 MICAL1Q8TDZ2 1067 aa18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 ASIC4Q96FT7 647 aa18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 PGBD1Q96JS3 809 aa18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 AGO4Q9HCK5 861 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 TYW1Q9NV66 732 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 GINS2Q9Y248 185 aa18.78■□□□□ 0.6
SHKBP1-215ENST00000597649 VPS13AQ96RL7 3174 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 PTPRZ1P23471 2315 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 LOXHD1Q8IVV2 1947 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 IGKV6D-21A0A0A0MT36 114 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 TBKBP1A7MCY6 615 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 C9IYK1 514 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 FGF18O76093 207 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 CCNE2O96020 404 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 MCM5P33992 734 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 LIFRP42702 1097 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 PTPN5P54829 565 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 KCNC3Q14003 757 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 DUSP6Q16828 381 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 HEATR3Q7Z4Q2 680 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 FBXL6Q8N531 539 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 FANCBQ8NB91 859 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 ADAM2Q99965 735 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 S1PR5Q9H228 398 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 RGS18Q9NS28 235 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 ST3GAL5Q9UNP4 418 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 PCDHB12Q9Y5F1 795 aa18.77■□□□□ 0.6
SHKBP1-215ENST00000597649 PLXNA4Q9HCM2 1894 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 SPTBN4Q9H254 2564 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 ZBTB42B2RXF5 422 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 MEIS1O00470 390 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 FSCN2O14926 492 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 RPS6KA5O75582 802 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 ATP4AP20648 1035 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 VCPP55072 806 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 UBE3AQ05086 875 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 CEP55Q53EZ4 464 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 SPOUT1Q5T280 376 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 WWC2Q6AWC2 1192 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 ABHD15Q6UXT9 468 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 COLGALT1Q8NBJ5 622 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 TNPO1Q92973 898 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 TMEM87BQ96K49 555 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 SDF4Q9BRK5 362 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 CWH43Q9H720 699 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 TLR9Q9NR96 1032 aa18.76■□□□□ 0.59
SHKBP1-215ENST00000597649 CALM1P0DP23 149 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 CALM2P0DP24 149 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 CALM3P0DP25 149 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 FGFR1P11362 822 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 ATF7P17544 494 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 FAM189BP81408 668 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 SIGLEC14Q08ET2 396 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 APOBRQ0VD83 1088 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 PKN1Q16512 942 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 SLC24A5Q71RS6 500 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 SUGP1Q8IWZ8 645 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 LSG1Q9H089 658 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 RIC8AQ9NPQ8 531 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 TMEM260Q9NX78 707 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 SLC12A7Q9Y666 1083 aa18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 RIF1Q5UIP0 2472 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-215ENST00000597649 DENND3A2RUS2 1198 aa18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 SLC27A2O14975 620 aa18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 HBP1O60381 514 aa18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 SYCE2Q6PIF2 218 aa18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 TMEM184AQ6ZMB5 413 aa18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 LRRC55Q6ZSA7 311 aa18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 CCDC60Q8IWA6 550 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 PPP1R16BQ96T49 567 aa18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 CDCA3Q99618 268 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 FAM86C1Q9NVL1 165 aa18.74■□□□□ 0.59
SHKBP1-215ENST00000597649 DDX39AO00148 427 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 DHX15O43143 795 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 SLC26A2P50443 739 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 FUT2Q10981 343 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 DSC3Q14574 896 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 KIZQ2M2Z5 673 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 FAM228AQ86W67 206 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 THNSL1Q8IYQ7 743 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 NEK1Q96PY6 1258 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 ESYT1Q9BSJ8 1104 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 APOL5Q9BWW9 433 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 AAASQ9NRG9 546 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 C1orf112Q9NSG2 853 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 RNF19AQ9NV58 838 aa18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 FNDC1Q4ZHG4 1894 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-215ENST00000597649 HIDE1A8MVS5 230 aa18.72■□□□□ 0.59
SHKBP1-215ENST00000597649 BACH1O14867 736 aa18.72■□□□□ 0.59
SHKBP1-215ENST00000597649 GPR182O15218 404 aa18.72■□□□□ 0.59
SHKBP1-215ENST00000597649 GPR32O75388 356 aa18.72■□□□□ 0.59
SHKBP1-215ENST00000597649 PDGFBP01127 241 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-215ENST00000597649 AVPR2P30518 371 aa18.72■□□□□ 0.59
SHKBP1-215ENST00000597649 TECP42680 631 aa18.72■□□□□ 0.59
SHKBP1-215ENST00000597649 PTPN21Q16825 1174 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms