RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 MMP13P45452 471 aa16.9■□□□□ 0.3
IRF3-219ENST00000597636 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
IRF3-219ENST00000597636 LRCH2Q5VUJ6 765 aa16.9■□□□□ 0.3
IRF3-219ENST00000597636 NELFCDQ8IXH7 590 aa16.9■□□□□ 0.3
IRF3-219ENST00000597636 ATP8B4Q8TF62 1192 aa16.9■□□□□ 0.3
IRF3-219ENST00000597636 FGFBP2Q9BYJ0 223 aa16.9■□□□□ 0.3
IRF3-219ENST00000597636 KIAA1551Q9HCM1 1747 aa16.89■□□□□ 0.3
IRF3-219ENST00000597636 CFAP73A6NFT4 308 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 ACTN1P12814 892 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 MYO1EQ12965 1108 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 PNMA8AQ86V59 439 aaPredicted RBP16.89■□□□□ 0.29
IRF3-219ENST00000597636 PGM2Q96G03 612 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 SPAG5Q96R06 1193 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 ADAM7Q9H2U9 754 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 BSDC1Q9NW68 430 aaPredicted RBP16.89■□□□□ 0.29
IRF3-219ENST00000597636 MINPP1Q9UNW1 487 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 BTAF1O14981 1849 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 SHBGP04278 402 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 NUDT17P0C025 328 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 DPY19L2P1Q6NXN4 242 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 NT5DC3Q86UY8 548 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 LRRC34Q8IZ02 419 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
IRF3-219ENST00000597636 CCHCR1Q8TD31 782 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 TRIM51Q9BSJ1 452 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 TRIM31Q9BZY9 425 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 EPB41L4BQ9H329 900 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 BATF3Q9NR55 127 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 TBC1D7Q9P0N9 293 aa16.89■□□□□ 0.29
IRF3-219ENST00000597636 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
IRF3-219ENST00000597636 FLOT1O75955 427 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 TDP2O95551 362 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 ECM1Q16610 540 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 TRPM8Q7Z2W7 1104 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 TBC1D1Q86TI0 1168 aaPredicted RBP16.88■□□□□ 0.29
IRF3-219ENST00000597636 SYCE1Q8N0S2 351 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 HES6Q96HZ4 224 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 SELENOSQ9BQE4 189 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 RAB17Q9H0T7 212 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 TTC7AQ9ULT0 858 aaPredicted RBP16.88■□□□□ 0.29
IRF3-219ENST00000597636 MYH4Q9Y623 1939 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 A0A0A6YYK5 440 aaPredicted RBP16.88■□□□□ 0.29
IRF3-219ENST00000597636 RPS6KA4O75676 772 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 UCHL3P15374 230 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 ADAM9Q13443 819 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 DAAM2Q86T65 1068 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 BMP2KQ9NSY1 1161 aaPredicted RBP16.88■□□□□ 0.29
IRF3-219ENST00000597636 SAMD15Q9P1V8 674 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 SEC63Q9UGP8 760 aaKnown RBP16.88■□□□□ 0.29
IRF3-219ENST00000597636 NENFQ9UMX5 172 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 C15orf41Q9Y2V0 281 aa16.88■□□□□ 0.29
IRF3-219ENST00000597636 EDIL3O43854 480 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 ANP32DO95626 131 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 APBA3O96018 575 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 H2AFZP0C0S5 128 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 SLC9A1P19634 815 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 KLRK1P26718 216 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 PRKCIP41743 596 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 ZNF268Q14587 947 aaPredicted RBP16.87■□□□□ 0.29
IRF3-219ENST00000597636 H2AFVQ71UI9 128 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 THOC1Q96FV9 657 aaKnown RBP16.87■□□□□ 0.29
IRF3-219ENST00000597636 ELAC2Q9BQ52 826 aaKnown RBP16.87■□□□□ 0.29
IRF3-219ENST00000597636 PABPC3Q9H361 631 aaKnown RBP16.87■□□□□ 0.29
IRF3-219ENST00000597636 KCTD10Q9H3F6 313 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 ZDHHC18Q9NUE0 388 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 NR2E1Q9Y466 385 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 PCDHA2Q9Y5H9 948 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 ESYT2A0FGR8 921 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 CCDC169A6NNP5 214 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 FGGP02679 453 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 SF3A3Q12874 501 aaKnown RBP eCLIP16.87■□□□□ 0.291e-6■■■■□ 19.4
IRF3-219ENST00000597636 TRAPPC3LQ5T215 181 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 ZC3H3Q8IXZ2 948 aaKnown RBP16.87■□□□□ 0.29
IRF3-219ENST00000597636 SLC24A3Q9HC58 644 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 VAT1LQ9HCJ6 419 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 KCNMB3Q9NPA1 279 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 L3MBTL1Q9Y468 752 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 CCDC88AQ3V6T2 1871 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 ATP8B3O60423 1300 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 ANXA13P27216 316 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 NPEPPSP55786 919 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 FAM133BQ5BKY9 247 aaKnown RBP16.87■□□□□ 0.29
IRF3-219ENST00000597636 DUPD1Q68J44 220 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 POTEAQ6S8J7 498 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 NEK9Q8TD19 979 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 SCFD1Q8WVM8 642 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 PIGSQ96S52 555 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 CCDC134Q9H6E4 229 aa16.87■□□□□ 0.29
IRF3-219ENST00000597636 INTS9Q9NV88 658 aaKnown RBP16.87■□□□□ 0.29
IRF3-219ENST00000597636 CETN3O15182 167 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 RXRBP28702 533 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 PMS2P54278 862 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 PTENP60484 403 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 NBPF5PQ86XG9 351 aaPredicted RBP16.86■□□□□ 0.29
IRF3-219ENST00000597636 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 SLC44A5Q8NCS7 719 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 RBM46Q8TBY0 533 aaKnown RBP16.86■□□□□ 0.29
IRF3-219ENST00000597636 ERP44Q9BS26 406 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms