RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 DNA2P51530 1060 aa24.89■■□□□ 1.58
SRRM1-222ENST00000596378 EPHA7Q15375 998 aa24.89■■□□□ 1.58
SRRM1-222ENST00000596378 NIM1KQ8IY84 436 aa24.89■■□□□ 1.58
SRRM1-222ENST00000596378 CCPG1Q9ULG6 757 aa24.89■■□□□ 1.58
SRRM1-222ENST00000596378 ERICH4A6NGS2 130 aa24.89■■□□□ 1.57
SRRM1-222ENST00000596378 TUBBP07437 444 aa24.89■■□□□ 1.57
SRRM1-222ENST00000596378 RPL13P26373 211 aaKnown RBP24.89■■□□□ 1.57
SRRM1-222ENST00000596378 PTK2Q05397 1052 aa24.89■■□□□ 1.57
SRRM1-222ENST00000596378 CXCL9Q07325 125 aa24.89■■□□□ 1.57
SRRM1-222ENST00000596378 GJB7Q6PEY0 223 aa24.89■■□□□ 1.57
SRRM1-222ENST00000596378 RBM46Q8TBY0 533 aaKnown RBP24.89■■□□□ 1.57
SRRM1-222ENST00000596378 SPAG5Q96R06 1193 aa24.89■■□□□ 1.57
SRRM1-222ENST00000596378 PARVGQ9HBI0 331 aa24.89■■□□□ 1.57
SRRM1-222ENST00000596378 ZNF536O15090 1300 aa24.88■■□□□ 1.57
SRRM1-222ENST00000596378 IPO5O00410 1097 aaKnown RBP24.88■■□□□ 1.57
SRRM1-222ENST00000596378 NFIBO00712 420 aa24.88■■□□□ 1.57
SRRM1-222ENST00000596378 IL31RAQ8NI17 732 aa24.88■■□□□ 1.57
SRRM1-222ENST00000596378 FIZ1Q96SL8 496 aa24.88■■□□□ 1.57
SRRM1-222ENST00000596378 LXNQ9BS40 222 aa24.88■■□□□ 1.57
SRRM1-222ENST00000596378 EHMT1Q9H9B1 1298 aa24.88■■□□□ 1.57
SRRM1-222ENST00000596378 FRMPD4Q14CM0 1322 aa24.88■■□□□ 1.57
SRRM1-222ENST00000596378 PALMO75781 387 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 ITGB5P18084 799 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 FKBP1CQ5VVH2 108 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 ZNF571Q7Z3V5 609 aaPredicted RBP24.87■■□□□ 1.57
SRRM1-222ENST00000596378 IRF2BP2Q7Z5L9 587 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 FAM83AQ86UY5 434 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 HDAC7Q8WUI4 952 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 PLCB1Q9NQ66 1216 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 TARSL2A2RTX5 802 aaKnown RBP24.87■■□□□ 1.57
SRRM1-222ENST00000596378 SLC16A3O15427 465 aaKnown RBP24.87■■□□□ 1.57
SRRM1-222ENST00000596378 PLA2G6O60733 806 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 FTCDO95954 541 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 PRLRP16471 622 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 PTGER2P43116 358 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 KIAA0753Q2KHM9 967 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 GRIPAP1Q4V328 841 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 SPATA4Q8NEY3 305 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 MS4A14Q96JA4 679 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 TEKT3Q9BXF9 490 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 SIX2Q9NPC8 291 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 GCNT4Q9P109 453 aa24.87■■□□□ 1.57
SRRM1-222ENST00000596378 ASNSP08243 561 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 TCP1P17987 556 aaKnown RBP24.86■■□□□ 1.57
SRRM1-222ENST00000596378 TNNT3P45378 269 aaPredicted RBP24.86■■□□□ 1.57
SRRM1-222ENST00000596378 NAB2Q15742 525 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 RNF10Q8N5U6 811 aaKnown RBP24.86■■□□□ 1.57
SRRM1-222ENST00000596378 HOOK2Q96ED9 719 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 MYH11P35749 1972 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 EGFRP00533 1210 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 CPXCR1Q8N123 301 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 AGBL3Q8NEM8 1001 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 NACC1Q96RE7 527 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 MXRA8Q9BRK3 442 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 LRRC1Q9BTT6 524 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 WDR11Q9BZH6 1224 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 METTL14Q9HCE5 456 aaKnown RBP24.86■■□□□ 1.57
SRRM1-222ENST00000596378 HOMER2Q9NSB8 354 aa24.86■■□□□ 1.57
SRRM1-222ENST00000596378 PACSIN2Q9UNF0 486 aaPredicted RBP24.86■■□□□ 1.57
SRRM1-222ENST00000596378 EIF3DO15371 548 aaKnown RBP eCLIP24.85■■□□□ 1.57
SRRM1-222ENST00000596378 SETQ01105 290 aaPredicted RBP24.85■■□□□ 1.57
SRRM1-222ENST00000596378 CCDC181Q5TID7 509 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 IQCEQ6IPM2 695 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 B3GNT9Q6UX72 402 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 GBP6Q6ZN66 633 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 MAEAQ7L5Y9 396 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 FAM178BQ8IXR5 827 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 TXLNBQ8N3L3 684 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 MTMR14Q8NCE2 650 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 BORCS6Q96GS4 357 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 ICAM1P05362 532 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 PLS1Q14651 629 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 ODR4Q5SWX8 454 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 ZNF720Q7Z2F6 126 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 FAM186BQ8IYM0 893 aa24.85■■□□□ 1.57
SRRM1-222ENST00000596378 ZBED3Q96IU2 234 aaPredicted RBP24.85■■□□□ 1.57
SRRM1-222ENST00000596378 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.85■■□□□ 1.57
SRRM1-222ENST00000596378 HSD17B4P51659 736 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 RASA3Q14644 834 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 KCTD17Q8N5Z5 321 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 MYOZ2Q9NPC6 264 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 LUC7LQ9NQ29 371 aaKnown RBP24.84■■□□□ 1.57
SRRM1-222ENST00000596378 PHF20L1A8MW92 1017 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 EIF3JO75822 258 aaKnown RBP24.84■■□□□ 1.57
SRRM1-222ENST00000596378 CYP2C19P33261 490 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 CYP2J2P51589 502 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 SLC7A5Q01650 507 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 ZNF572Q7Z3I7 529 aaPredicted RBP24.84■■□□□ 1.57
SRRM1-222ENST00000596378 MMGT1Q8N4V1 131 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 CLEC4DQ8WXI8 215 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 KCNH7Q9NS40 1196 aa24.84■■□□□ 1.57
SRRM1-222ENST00000596378 DMGDHQ9UI17 866 aaKnown RBP24.84■■□□□ 1.57
SRRM1-222ENST00000596378 ZNF131P52739 623 aa24.83■■□□□ 1.57
SRRM1-222ENST00000596378 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
SRRM1-222ENST00000596378 DEFB132Q7Z7B7 95 aa24.83■■□□□ 1.57
SRRM1-222ENST00000596378 TEX2Q8IWB9 1127 aa24.83■■□□□ 1.57
SRRM1-222ENST00000596378 CCDC102AQ96A19 550 aa24.83■■□□□ 1.57
SRRM1-222ENST00000596378 VPS18Q9P253 973 aa24.83■■□□□ 1.57
SRRM1-222ENST00000596378 PSMC2P35998 433 aaKnown RBP24.83■■□□□ 1.56
SRRM1-222ENST00000596378 POTEAQ6S8J7 498 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms