RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 MUTP22033 750 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 KLRC1P26715 233 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 YWHABP31946 246 aaKnown RBP11.84□□□□□ -0.51
LIG1-210ENST00000596332 RARRES1P49788 294 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 CHMP4BP1P59074 171 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 PPFIA1Q13136 1202 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 MBTPS1Q14703 1052 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 STK38Q15208 465 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 PTGISQ16647 500 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 ZNF484Q5JVG2 852 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 KRI1Q8N9T8 703 aaKnown RBP11.84□□□□□ -0.51
LIG1-210ENST00000596332 NEK9Q8TD19 979 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 SYMPKQ92797 1274 aaKnown RBP11.84□□□□□ -0.51
LIG1-210ENST00000596332 ATP6V0A1Q93050 837 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 AK8Q96MA6 479 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
LIG1-210ENST00000596332 WNT8AQ9H1J5 351 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 DHX33Q9H6R0 707 aaKnown RBP11.84□□□□□ -0.51
LIG1-210ENST00000596332 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 ANKEF1Q9NU02 776 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 CFAP45Q9UL16 551 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 KIAA1024Q9UPX6 916 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 PCDHA2Q9Y5H9 948 aa11.84□□□□□ -0.51
LIG1-210ENST00000596332 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
LIG1-210ENST00000596332 COL1A2P08123 1366 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 FAM237AA0A1B0GTK4 181 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 RRN3P2A6NIE6 340 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 MAFO75444 373 aaPredicted RBP11.83□□□□□ -0.52
LIG1-210ENST00000596332 CCT6AP40227 531 aaKnown RBP11.83□□□□□ -0.52
LIG1-210ENST00000596332 IGBP1P78318 339 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 PTK7Q13308 1070 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 KARSQ15046 597 aaKnown RBP11.83□□□□□ -0.52
LIG1-210ENST00000596332 E2F4Q16254 413 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 TMEM266Q2M3C6 531 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 FAM47CQ5HY64 1035 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 RPAINQ86UA6 219 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 SNX29Q8TEQ0 813 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 DDX19AQ9NUU7 478 aaKnown RBP11.83□□□□□ -0.52
LIG1-210ENST00000596332 DBR1Q9UK59 544 aaKnown RBP11.83□□□□□ -0.52
LIG1-210ENST00000596332 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
LIG1-210ENST00000596332 SMIM35A0A1B0GVV1 85 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 DCDC2CA8MYV0 355 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 CUTAO60888 179 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 CLTBP09497 229 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 KRT85P78386 507 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 MGAT3Q09327 533 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 TCTN1Q2MV58 587 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 ARSHQ5FYA8 562 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 FAM26DQ5JW98 314 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 RESP18Q5W5W9 173 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 ADALQ6DHV7 355 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 C16orf59Q7L2K0 433 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 CABP7Q86V35 215 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 KCNG4Q8TDN1 519 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 FAM167AQ96KS9 214 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 NACC1Q96RE7 527 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 PLIN2Q99541 437 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 MTRQ99707 1265 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 TCEAL9Q9UHQ7 104 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 HPSEQ9Y251 543 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 MROH7Q68CQ1 1323 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 TCHHQ07283 1943 aa11.82□□□□□ -0.52
LIG1-210ENST00000596332 SLC26A4O43511 780 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 EYA4O95677 639 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 CHRNA1P02708 482 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 CKBP12277 381 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 PLCG1P19174 1290 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 CYP2C18P33260 490 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 EPHB4P54760 987 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 SLC12A3P55017 1021 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 MAPK7Q13164 816 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 MTERF2Q49AM1 385 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 ZNF618Q5T7W0 954 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 KRT79Q5XKE5 535 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 C1orf186Q6ZWK4 172 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 CKAP2LQ8IYA6 745 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 C7orf61Q8IZ16 206 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 DAW1Q8N136 415 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 LRRC71Q8N4P6 559 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 SYT2Q8N9I0 419 aaPredicted RBP11.81□□□□□ -0.52
LIG1-210ENST00000596332 DNAJB3Q8WWF6 145 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 SPATA32Q96LK8 384 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 HTATIP2Q9BUP3 242 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 PANK2Q9BZ23 570 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 RAB34Q9BZG1 259 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 ADAMTS10Q9H324 1103 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 GOLPH3LQ9H4A5 285 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 POLD4Q9HCU8 107 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 SEPT9Q9UHD8 586 aaPredicted RBP11.81□□□□□ -0.52
LIG1-210ENST00000596332 TUBE1Q9UJT0 475 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 ATP6V1DQ9Y5K8 247 aa11.81□□□□□ -0.52
LIG1-210ENST00000596332 MYH9P35579 1960 aaKnown RBP11.8□□□□□ -0.52
LIG1-210ENST00000596332 EVI5O60447 810 aa11.8□□□□□ -0.52
LIG1-210ENST00000596332 DKC1O60832 514 aaKnown RBP eCLIP11.8□□□□□ -0.52
LIG1-210ENST00000596332 GADD45BO75293 160 aaPredicted RBP11.8□□□□□ -0.52
LIG1-210ENST00000596332 GPR32O75388 356 aa11.8□□□□□ -0.52
LIG1-210ENST00000596332 TIMP1P01033 207 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms