RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 SFR1Q86XK3 245 aa18.92■□□□□ 0.62
ARHGEF1-213ENST00000595897 PARP9Q8IXQ6 854 aa18.92■□□□□ 0.62
ARHGEF1-213ENST00000595897 SPATA31A1Q5TZJ5 1347 aa18.92■□□□□ 0.62
ARHGEF1-213ENST00000595897 CALUO43852 315 aaPredicted RBP18.92■□□□□ 0.62
ARHGEF1-213ENST00000595897 AKAP3O75969 853 aa18.92■□□□□ 0.62
ARHGEF1-213ENST00000595897 ZNF543Q08ER8 600 aa18.92■□□□□ 0.62
ARHGEF1-213ENST00000595897 MFSD14BQ5SR56 506 aa18.92■□□□□ 0.62
ARHGEF1-213ENST00000595897 ZC3H3Q8IXZ2 948 aaKnown RBP18.92■□□□□ 0.62
ARHGEF1-213ENST00000595897 RASGEF1CQ8N431 466 aa18.92■□□□□ 0.62
ARHGEF1-213ENST00000595897 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 CLK2P49760 499 aaKnown RBP18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 FUKQ8N0W3 1084 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 TATDN2Q93075 761 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 RAB17Q9H0T7 212 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 TRAF3IP3Q9Y228 551 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 PCDHB13Q9Y5F0 798 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 PITPNM2Q9BZ72 1349 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 USP17L10C9JJH3 530 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 DDX3XO00571 662 aaKnown RBP eCLIP18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 ABCB4P21439 1286 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 GALCP54803 685 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 SLC12A3P55017 1021 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 RHBDL3P58872 404 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 NEDD9Q14511 834 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 KCTD1Q719H9 257 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 SLFN11Q7Z7L1 901 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 CNOT10Q9H9A5 744 aaKnown RBP18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 CD209Q9NNX6 404 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 OSGEPQ9NPF4 335 aa18.91■□□□□ 0.62
ARHGEF1-213ENST00000595897 TLDC2A0PJX2 215 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 ZBTB5O15062 677 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 GNPATO15228 680 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 TTLL1O95922 423 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 SCTRP47872 440 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 SF3A3Q12874 501 aaKnown RBP eCLIP18.9■□□□□ 0.627e-23■■■■□ 24.9
ARHGEF1-213ENST00000595897 PAXIP1Q6ZW49 1069 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 NAP1L4Q99733 375 aaKnown RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 AJAP1Q9UKB5 411 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 PNMA2Q9UL42 364 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 DNM3Q9UQ16 869 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 A0A0A6YYK5 440 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 CLIC2O15247 247 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 PAEPP09466 180 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 ZBTB48P10074 688 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 RPL13P26373 211 aaKnown RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 NOVP48745 357 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 EIF3BP55884 814 aaKnown RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 GRAPQ13588 217 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 EPHA7Q15375 998 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 DPY19L2P1Q6NXN4 242 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 HOOK3Q86VS8 718 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 GRAPLQ8TC17 118 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 CHMP6Q96FZ7 201 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 SGSM3Q96HU1 749 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 HES6Q96HZ4 224 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 SELENOSQ9BQE4 189 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 REEP2Q9BRK0 252 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 LRRC4CQ9HCJ2 640 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 SMIM23A6NLE4 172 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 BUB1BO60566 1050 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 UFL1O94874 794 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 SNHG28P0DPA3 235 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 ANXA13P27216 316 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 NF2P35240 595 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 RFC4P35249 363 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 STAT1P42224 750 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 CASP4P49662 377 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 PSMC6P62333 389 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 GIT2Q14161 759 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 GLYCTKQ8IVS8 523 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 SLF2Q8IX21 1173 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 METTL14Q9HCE5 456 aaKnown RBP18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 STXBP5LQ9Y2K9 1186 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 NR2E1Q9Y466 385 aa18.9■□□□□ 0.62
ARHGEF1-213ENST00000595897 NAV1Q8NEY1 1877 aa18.89■□□□□ 0.62
ARHGEF1-213ENST00000595897 GOLGA6L10A0A0M3HER8 536 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 FRMD3A2A2Y4 597 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 MPHOSPH10O00566 681 aaKnown RBP18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 CAND2O75155 1236 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 NR3C1P04150 777 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 COPB2P35606 906 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 DR1Q01658 176 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 CATSPER3Q86XQ3 398 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 HVCN1Q96D96 273 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 SEPT11Q9NVA2 429 aaKnown RBP18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 C5orf60A6NFR6 353 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 SPDYE3A6NKU9 549 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 BHMG1C9JSJ3 638 aaPredicted RBP18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 PDXKO00764 312 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 GCNT3O95395 438 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 FERP16591 822 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 CCDC50Q8IVM0 306 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 SLC35G2Q8TBE7 412 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 CTNNBL1Q8WYA6 563 aaPredicted RBP18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 XPO6Q96QU8 1125 aaKnown RBP18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 COL14A1Q05707 1796 aaKnown RBP18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 MYH4Q9Y623 1939 aa18.89■□□□□ 0.61
ARHGEF1-213ENST00000595897 PRR16Q569H4 304 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms