RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 FOSBP53539 338 aa17.79■□□□□ 0.44
ZNF550-207ENST00000595560 PRKCEQ02156 737 aa17.79■□□□□ 0.44
ZNF550-207ENST00000595560 PPP2R5CQ13362 524 aa17.79■□□□□ 0.44
ZNF550-207ENST00000595560 TSHZ1Q6ZSZ6 1077 aa17.79■□□□□ 0.44
ZNF550-207ENST00000595560 USP38Q8NB14 1042 aa17.79■□□□□ 0.44
ZNF550-207ENST00000595560 TBC1D32Q96NH3 1257 aa17.79■□□□□ 0.44
ZNF550-207ENST00000595560 VAV3Q9UKW4 847 aa17.79■□□□□ 0.44
ZNF550-207ENST00000595560 TRPV2Q9Y5S1 764 aa17.79■□□□□ 0.44
ZNF550-207ENST00000595560 SQORQ9Y6N5 450 aa17.79■□□□□ 0.44
ZNF550-207ENST00000595560 FOSL2P15408 326 aa17.78■□□□□ 0.44
ZNF550-207ENST00000595560 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.78■□□□□ 0.44
ZNF550-207ENST00000595560 TMCO2Q7Z6W1 182 aaPredicted RBP17.78■□□□□ 0.44
ZNF550-207ENST00000595560 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
ZNF550-207ENST00000595560 KIAA0319LQ8IZA0 1049 aa17.78■□□□□ 0.44
ZNF550-207ENST00000595560 HAS1Q92839 578 aa17.78■□□□□ 0.44
ZNF550-207ENST00000595560 C8orf76Q96K31 380 aa17.78■□□□□ 0.44
ZNF550-207ENST00000595560 ZBED2Q9BTP6 218 aa17.78■□□□□ 0.44
ZNF550-207ENST00000595560 NRBP2Q9NSY0 501 aa17.78■□□□□ 0.44
ZNF550-207ENST00000595560 COL4A6Q14031 1691 aa17.77■□□□□ 0.44
ZNF550-207ENST00000595560 MAGEB2O15479 319 aa17.77■□□□□ 0.44
ZNF550-207ENST00000595560 TMEM62Q0P6H9 643 aa17.77■□□□□ 0.44
ZNF550-207ENST00000595560 SAFBQ15424 915 aaKnown RBP eCLIP17.77■□□□□ 0.44
ZNF550-207ENST00000595560 TRMT1LQ7Z2T5 733 aaKnown RBP17.77■□□□□ 0.44
ZNF550-207ENST00000595560 SLFN12Q8IYM2 578 aa17.77■□□□□ 0.44
ZNF550-207ENST00000595560 MYOCDQ8IZQ8 938 aa17.77■□□□□ 0.44
ZNF550-207ENST00000595560 RAD9AQ99638 391 aa17.77■□□□□ 0.44
ZNF550-207ENST00000595560 CELF4Q9BZC1 486 aaKnown RBP17.77■□□□□ 0.44
ZNF550-207ENST00000595560 PRDM12Q9H4Q4 367 aa17.77■□□□□ 0.44
ZNF550-207ENST00000595560 TTC3P53804 2025 aa17.76■□□□□ 0.43
ZNF550-207ENST00000595560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.76■□□□□ 0.43
ZNF550-207ENST00000595560 TAP1Q03518 808 aa17.76■□□□□ 0.43
ZNF550-207ENST00000595560 MAFAQ8NHW3 353 aaPredicted RBP17.76■□□□□ 0.43
ZNF550-207ENST00000595560 GAS2L1Q99501 681 aaPredicted RBP17.76■□□□□ 0.43
ZNF550-207ENST00000595560 AGO3Q9H9G7 860 aaKnown RBP17.76■□□□□ 0.43
ZNF550-207ENST00000595560 PRUNE2Q8WUY3 3088 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 COL4A4P53420 1690 aaPredicted RBP17.75■□□□□ 0.43
ZNF550-207ENST00000595560 LCHNA4D1U4 455 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 EML1O00423 815 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 ARHGEF15O94989 841 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 CD52P31358 61 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 PSMC5P62195 406 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 HTRA4P83105 476 aaPredicted RBP17.75■□□□□ 0.43
ZNF550-207ENST00000595560 GUCY1B3Q02153 619 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 SPIRE1Q08AE8 756 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 TARBP2Q15633 366 aaKnown RBP17.75■□□□□ 0.43
ZNF550-207ENST00000595560 XKR3Q5GH77 459 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 METTL13Q8N6R0 699 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 LINC01465Q8N7H1 131 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 FAM184AQ8NB25 1140 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 FBXO18Q8NFZ0 1043 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 TOP1MTQ969P6 601 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 NIFKQ9BYG3 293 aaKnown RBP17.75■□□□□ 0.43
ZNF550-207ENST00000595560 INSL6Q9Y581 213 aa17.75■□□□□ 0.43
ZNF550-207ENST00000595560 MARCH6O60337 910 aa17.74■□□□□ 0.43
ZNF550-207ENST00000595560 NEMFO60524 1076 aa17.74■□□□□ 0.43
ZNF550-207ENST00000595560 STBD1O95210 358 aa17.74■□□□□ 0.43
ZNF550-207ENST00000595560 BAG4O95429 457 aaKnown RBP17.74■□□□□ 0.43
ZNF550-207ENST00000595560 PAK2Q13177 524 aa17.74■□□□□ 0.43
ZNF550-207ENST00000595560 FAM117BQ6P1L5 589 aa17.74■□□□□ 0.43
ZNF550-207ENST00000595560 FAM43BQ6ZT52 329 aaPredicted RBP17.74■□□□□ 0.43
ZNF550-207ENST00000595560 BANK1Q8NDB2 785 aa17.74■□□□□ 0.43
ZNF550-207ENST00000595560 FTHL17Q9BXU8 183 aa17.74■□□□□ 0.43
ZNF550-207ENST00000595560 FOXP1Q9H334 677 aaPredicted RBP17.74■□□□□ 0.43
ZNF550-207ENST00000595560 SEPT9Q9UHD8 586 aaPredicted RBP17.74■□□□□ 0.43
ZNF550-207ENST00000595560 ARID2Q68CP9 1835 aa17.74■□□□□ 0.43
ZNF550-207ENST00000595560 NLRC5Q86WI3 1866 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 WNT7AO00755 349 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 DKC1O60832 514 aaKnown RBP eCLIP17.73■□□□□ 0.43
ZNF550-207ENST00000595560 CD2BP2O95400 341 aaKnown RBP17.73■□□□□ 0.43
ZNF550-207ENST00000595560 TMOD1P28289 359 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 QARSP47897 775 aaKnown RBP17.73■□□□□ 0.43
ZNF550-207ENST00000595560 MCM2P49736 904 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 CLCN3P51790 818 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 TBC1D8BQ0IIM8 1120 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 ADGRE1Q14246 886 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 CALCRLQ16602 461 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 EFCAB12Q6NXP0 572 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 ZNF710Q8N1W2 664 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 SP7Q8TDD2 431 aaPredicted RBP17.73■□□□□ 0.43
ZNF550-207ENST00000595560 TMX3Q96JJ7 454 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 MAP7D2Q96T17 732 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 PADI3Q9ULW8 664 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 UNC80Q8N2C7 3258 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 RALGAPA2Q2PPJ7 1873 aa17.73■□□□□ 0.43
ZNF550-207ENST00000595560 LINC01553A4QN01 128 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 ENPP3O14638 875 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 GPR32O75388 356 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 VTNP04004 478 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 P4HBP07237 508 aaKnown RBP17.72■□□□□ 0.43
ZNF550-207ENST00000595560 CRYBB1P53674 252 aaPredicted RBP17.72■□□□□ 0.43
ZNF550-207ENST00000595560 EPHA7Q15375 998 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 KIZQ2M2Z5 673 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 ANO5Q75V66 913 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 TMEM40Q8WWA1 233 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 LINC01599Q8WXQ3 324 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 CEP89Q96ST8 783 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 CDHR5Q9HBB8 845 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 GINS2Q9Y248 185 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 KIF3AQ9Y496 699 aa17.72■□□□□ 0.43
ZNF550-207ENST00000595560 TMEM150BA6NC51 233 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms