RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 IRAK1P51617 712 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 PPP2R5CQ13362 524 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 CCDC155Q8N6L0 562 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 CABS1Q96KC9 395 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 WRNIP1Q96S55 665 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 SLC38A10Q9HBR0 1119 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 SFI1A8K8P3 1242 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 IPO5O00410 1097 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 EYA4O95677 639 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 ITGB5P18084 799 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 PPFIA1Q13136 1202 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 RETREG2Q8NC44 543 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 IL31RAQ8NI17 732 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 COG1Q8WTW3 980 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 KCTD10Q9H3F6 313 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 UNC45AQ9H3U1 944 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 MMRN2Q9H8L6 949 aa18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 CTDP1Q9Y5B0 961 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 EPN1Q9Y6I3 576 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-205ENST00000594973 A6NNZ2 444 aa18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 EPHB6O15197 1021 aa18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 TBCAO75347 108 aaKnown RBP18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 NDUFA10O95299 355 aa18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 TUBB8Q3ZCM7 444 aa18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 FBXW10Q5XX13 1052 aa18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 EP400NLQ6ZTU2 488 aa18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 SPATS2Q86XZ4 545 aaKnown RBP18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 TRPM4Q8TD43 1214 aa18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 BCCIPQ9P287 314 aaKnown RBP eCLIP18.71■□□□□ 0.58
SHKBP1-205ENST00000594973 TARSL2A2RTX5 802 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 MYBP10242 640 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 USP14P54578 494 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 ZBED6P86452 979 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 DCAF15Q66K64 600 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 GPIHBP1Q8IV16 184 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 SLC35F6Q8N357 371 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 WNK4Q96J92 1243 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 MXRA8Q9BRK3 442 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 WDR11Q9BZH6 1224 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 ZNHIT6Q9NWK9 470 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 PPP1R9AQ9ULJ8 1098 aa18.7■□□□□ 0.58
SHKBP1-205ENST00000594973 CCDC189A1A4V9 331 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 ADAM9Q13443 819 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 RINT1Q6NUQ1 792 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 MCF2L2Q86YR7 1114 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 TUFT1Q9NNX1 390 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 WRAP73Q9P2S5 460 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 SIK3Q9Y2K2 1263 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 NOA1Q8NC60 698 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 TEKT3Q9BXF9 490 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 PICK1Q9NRD5 415 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 KCNH7Q9NS40 1196 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 MYO6Q9UM54 1294 aa18.69■□□□□ 0.58
SHKBP1-205ENST00000594973 EIF2AK2P19525 551 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 AMPD2Q01433 879 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 FOXR2Q6PJQ5 311 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 B4GALNT4Q76KP1 1039 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 SCYL3Q8IZE3 742 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 GIMAP7Q8NHV1 300 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 TFR2Q9UP52 801 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 REXO2Q9Y3B8 237 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 FSBPO95073 299 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 GCNT3O95395 438 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 NR2F2P24468 414 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 BACE1P56817 501 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 RPS6P62753 249 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 NEDD9Q14511 834 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 MEA1Q16626 185 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 SYTL5Q8TDW5 730 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 CEP63Q96MT8 703 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 PURBQ96QR8 312 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 GINM1Q9NU53 330 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 GGA3Q9NZ52 723 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 ZHX2Q9Y6X8 837 aa18.68■□□□□ 0.58
SHKBP1-205ENST00000594973 EIF3HO15372 352 aaKnown RBP eCLIP18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 ZBED4O75132 1171 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 HOXD13P35453 343 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 PRKG1Q13976 671 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 KNOP1Q1ED39 458 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 FIGNQ5HY92 759 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 KRT26Q7Z3Y9 468 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 ZNF280CQ8ND82 737 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 ATG4CQ96DT6 458 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 TAAR1Q96RJ0 339 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 LXNQ9BS40 222 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 CRACR2AQ9BSW2 395 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 NHEJ1Q9H9Q4 299 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 TRIM10Q9UDY6 481 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 A0A1W2PQJ5 194 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 GOLGA6CA6NDK9 693 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 GOLGA6DP0CG33 693 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 PTPRAP18433 802 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 ARHGAP25P42331 645 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 HMGCS2P54868 508 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 KCNA1Q09470 495 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 NSMFQ6X4W1 530 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 MYCT1Q8N699 235 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 BCAS4Q8TDM0 211 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 RPGRIP1Q96KN7 1286 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms