RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 KANK3Q6NY19 840 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 CXCL17Q6UXB2 119 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 SV2BQ7L1I2 683 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 TRMT1LQ7Z2T5 733 aaKnown RBP12.09□□□□□ -0.47
USE1-204ENST00000594399 ARRDC4Q8NCT1 418 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 TSEN34Q9BSV6 310 aaKnown RBP12.09□□□□□ -0.47
USE1-204ENST00000594399 BHMT2Q9H2M3 363 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 NRBP2Q9NSY0 501 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 OGDHLQ9ULD0 1010 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 PPME1Q9Y570 386 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 A0A087WWV3 80 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 TMEM150BA6NC51 233 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 HAS3O00219 553 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 DNM1LO00429 736 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 ZBTB39O15060 712 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 HBP1O60381 514 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 CABYRO75952 493 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 GJA8P48165 433 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 RARRES1P49788 294 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 PSEN2P49810 448 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 SLC12A3P55017 1021 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 KIAA0753Q2KHM9 967 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 MTERF2Q49AM1 385 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 PRPF38BQ5VTL8 546 aaKnown RBP12.08□□□□□ -0.48
USE1-204ENST00000594399 GPBP1Q86WP2 473 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
USE1-204ENST00000594399 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
USE1-204ENST00000594399 KAT2BQ92831 832 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 SYAP1Q96A49 352 aaPredicted RBP12.08□□□□□ -0.48
USE1-204ENST00000594399 CEP170P1Q96L14 293 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 NIFKQ9BYG3 293 aaKnown RBP12.08□□□□□ -0.48
USE1-204ENST00000594399 LRRC27Q9C0I9 530 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 CLSTN2Q9H4D0 955 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 KBTBD4Q9NVX7 518 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 HOOK1Q9UJC3 728 aaKnown RBP12.08□□□□□ -0.48
USE1-204ENST00000594399 CEP290O15078 2479 aa12.08□□□□□ -0.48
USE1-204ENST00000594399 COL1A2P08123 1366 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 BRCA2P51587 3418 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 TRAK2O60296 914 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 USO1O60763 962 aaKnown RBP12.07□□□□□ -0.48
USE1-204ENST00000594399 AFMP43652 599 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 ACLYP53396 1101 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 NPEPPSP55786 919 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 AMPD3Q01432 767 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 PPFIA1Q13136 1202 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 DHX8Q14562 1220 aaKnown RBP12.07□□□□□ -0.48
USE1-204ENST00000594399 POSTNQ15063 836 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 ZNF484Q5JVG2 852 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 GRAMD1CQ8IYS0 662 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 PAGE5Q96GU1 130 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 RNPEPQ9H4A4 650 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 CYP26B1Q9NR63 512 aa12.07□□□□□ -0.48
USE1-204ENST00000594399 A0A1W2PQ45 241 aaPredicted RBP12.06□□□□□ -0.48
USE1-204ENST00000594399 A0A1W2PQY0 241 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 ZBTB42B2RXF5 422 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 GTPBP6O43824 516 aaPredicted RBP12.06□□□□□ -0.48
USE1-204ENST00000594399 SGPL1O95470 568 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 KRT18P05783 430 aaKnown RBP12.06□□□□□ -0.48
USE1-204ENST00000594399 MYL1P05976 194 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 SMIM10L2AP0DMW4 78 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 SMIM10L2BP0DMW5 78 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 INSRRP14616 1297 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 RFC5P40937 340 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 CHMP4BP1P59074 171 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 TARBP2Q15633 366 aaKnown RBP12.06□□□□□ -0.48
USE1-204ENST00000594399 GRIK4Q16099 956 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 CCDC183Q5T5S1 534 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 CAVIN1Q6NZI2 390 aaKnown RBP12.06□□□□□ -0.48
USE1-204ENST00000594399 PADI6Q6TGC4 694 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 ELOA2Q8IYF1 753 aaPredicted RBP12.06□□□□□ -0.48
USE1-204ENST00000594399 C7orf31Q8N865 590 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 STAMQ92783 540 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 GLT1D1Q96MS3 346 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 MTRQ99707 1265 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 SH2D3AQ9BRG2 576 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 RUSC1Q9BVN2 902 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 KCND2Q9NZV8 630 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 PHF24Q9UPV7 400 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 NRCAMQ92823 1304 aa12.06□□□□□ -0.48
USE1-204ENST00000594399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.05□□□□□ -0.48
USE1-204ENST00000594399 RRN3P2A6NIE6 340 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 DGAT1O75907 488 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 TFRCP02786 760 aaKnown RBP12.05□□□□□ -0.48
USE1-204ENST00000594399 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 CYP11B2P19099 503 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 GUCY2CP25092 1073 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 POLGP54098 1239 aaPredicted RBP12.05□□□□□ -0.48
USE1-204ENST00000594399 IGBP1P78318 339 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 TBC1D8BQ0IIM8 1120 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 EMC2Q15006 297 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 CAMK4Q16566 473 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 RINT1Q6NUQ1 792 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 C1orf186Q6ZWK4 172 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 EXOC8Q8IYI6 725 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
USE1-204ENST00000594399 LMBR1Q8WVP7 490 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms