RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 PDCP20941 246 aa16.34■□□□□ 0.21
VRK3-206ENST00000594090 TARBP2Q15633 366 aaKnown RBP16.34■□□□□ 0.21
VRK3-206ENST00000594090 TCTN1Q2MV58 587 aa16.34■□□□□ 0.21
VRK3-206ENST00000594090 IER5Q5VY09 327 aa16.34■□□□□ 0.21
VRK3-206ENST00000594090 FAM109BQ6ICB4 259 aaPredicted RBP16.34■□□□□ 0.21
VRK3-206ENST00000594090 NEK9Q8TD19 979 aa16.34■□□□□ 0.21
VRK3-206ENST00000594090 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
VRK3-206ENST00000594090 EIF2AK1Q9BQI3 630 aaKnown RBP16.34■□□□□ 0.21
VRK3-206ENST00000594090 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
VRK3-206ENST00000594090 RGL1Q9NZL6 768 aa16.34■□□□□ 0.21
VRK3-206ENST00000594090 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.33■□□□□ 0.2
VRK3-206ENST00000594090 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.33■□□□□ 0.2
VRK3-206ENST00000594090 VPS37CA5D8V6 355 aaPredicted RBP16.33■□□□□ 0.2
VRK3-206ENST00000594090 M0QZ92 97 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 MAGEB2O15479 319 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 GHRP10912 638 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 CYP4A11Q02928 519 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 TMEM62Q0P6H9 643 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 MTERF2Q49AM1 385 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 RILPL1Q5EBL4 403 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 ANO5Q75V66 913 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 C4orf19Q8IY42 314 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 KIAA0319LQ8IZA0 1049 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 METTL13Q8N6R0 699 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 C4orf32Q8N8J7 132 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 DBF4BQ8NFT6 615 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 TRPV2Q9Y5S1 764 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 SLC4A7Q9Y6M7 1214 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 ARID2Q68CP9 1835 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 PTPRSQ13332 1948 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 EVPLQ92817 2033 aa16.33■□□□□ 0.2
VRK3-206ENST00000594090 MICAL3Q7RTP6 2002 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 DDX11L8A8MPP1 907 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 GRXCR1A8MXD5 290 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 CLCN3P51790 818 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 TBC1D8BQ0IIM8 1120 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 PTGDRQ13258 359 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 CTTNQ14247 550 aaKnown RBP16.32■□□□□ 0.2
VRK3-206ENST00000594090 PLA2G4FQ68DD2 849 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 GPR153Q6NV75 609 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 NME8Q8N427 588 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 LINC01465Q8N7H1 131 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 CEP89Q96ST8 783 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 SH2D3AQ9BRG2 576 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 ZSWIM4Q9H7M6 989 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.32■□□□□ 0.2
VRK3-206ENST00000594090 GBF1Q92538 1859 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 KDM3AQ9Y4C1 1321 aa16.32■□□□□ 0.2
VRK3-206ENST00000594090 ABHD14A-ACY1A0A1B0GW23 586 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 SLITRK3O94933 977 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 SYT1P21579 422 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 YWHABP31946 246 aaKnown RBP16.31■□□□□ 0.2
VRK3-206ENST00000594090 TECP42680 631 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 WDR5P61964 334 aaKnown RBP16.31■□□□□ 0.2
VRK3-206ENST00000594090 IKBKEQ14164 716 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 LPIN1Q14693 890 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 FBXO47Q5MNV8 452 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 EFCAB12Q6NXP0 572 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 BRAPQ7Z569 592 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 TPH2Q8IWU9 490 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 LRRC71Q8N4P6 559 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 SEPT8Q92599 483 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 SLC9A7Q96T83 725 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 HSD17B14Q9BPX1 270 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 IFIH1Q9BYX4 1025 aaKnown RBP16.31■□□□□ 0.2
VRK3-206ENST00000594090 CELF4Q9BZC1 486 aaKnown RBP16.31■□□□□ 0.2
VRK3-206ENST00000594090 SZT2Q5T011 3432 aa16.31■□□□□ 0.2
VRK3-206ENST00000594090 LOXHD1Q8IVV2 1947 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 LAD1O00515 517 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 EFCAB14O75071 495 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 VTNP04004 478 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 ATP2A2P16615 1042 aaKnown RBP16.3■□□□□ 0.2
VRK3-206ENST00000594090 TMOD1P28289 359 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 KCNJ6P48051 423 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 FXR2P51116 673 aaKnown RBP eCLIP16.3■□□□□ 0.2
VRK3-206ENST00000594090 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
VRK3-206ENST00000594090 TMEM266Q2M3C6 531 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 TSHZ1Q6ZSZ6 1077 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 APBB2Q92870 758 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 MAP7D2Q96T17 732 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 CYP26B1Q9NR63 512 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 AKT3Q9Y243 479 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 SQORQ9Y6N5 450 aa16.3■□□□□ 0.2
VRK3-206ENST00000594090 IGKV6-21A0A0C4DH24 114 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 LYPLA2O95372 231 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 DNAJB2P25686 324 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 PBX2P40425 430 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 PRPHP41219 470 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 NPEPPSP55786 919 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 DEFB103AP81534 67 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 OTUD6AQ7L8S5 288 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 FERMT3Q86UX7 667 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 USP38Q8NB14 1042 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 CEP170P1Q96L14 293 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 PPP1R16BQ96T49 567 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 PBX4Q9BYU1 374 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 SUGCTQ9HAC7 445 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 PPME1Q9Y570 386 aa16.29■□□□□ 0.2
VRK3-206ENST00000594090 ZBTB39O15060 712 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms