RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SSBP05455 408 aaKnown RBP eCLIP14.98□□□□□ -0.01
VMP1-217ENST00000593168 PSAPP07602 524 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 UBA1P22314 1058 aaKnown RBP14.98□□□□□ -0.01
VMP1-217ENST00000593168 CNGA1P29973 690 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 RTP1P59025 263 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 ACTR2P61160 394 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 PSMC5P62195 406 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 ASIC1P78348 528 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 MIS18BP1Q6P0N0 1132 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 CCDC62Q6P9F0 684 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 ABHD15Q6UXT9 468 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 EEPD1Q7L9B9 569 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 BANK1Q8NDB2 785 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 SCFD2Q8WU76 684 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 DDX12PQ92771 950 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 DNAJC19Q96DA6 116 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 MAML3Q96JK9 1138 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 SYNGAP1Q96PV0 1343 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 IGHA2P01877 340 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 ERCC5P28715 1186 aaPredicted RBP14.97□□□□□ -0.01
VMP1-217ENST00000593168 CYP2C19P33261 490 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 PSMD2Q13200 908 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 TTLL4Q14679 1199 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 ZNF697Q5TEC3 545 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 METTL7BQ6UX53 244 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 CYFIP1Q7L576 1253 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 GPBP1Q86WP2 473 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 BHMT2Q9H2M3 363 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 BCAS3Q9H6U6 928 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.97□□□□□ -0.01
VMP1-217ENST00000593168 KCND2Q9NZV8 630 aa14.97□□□□□ -0.01
VMP1-217ENST00000593168 WRAP73Q9P2S5 460 aaPredicted RBP14.97□□□□□ -0.01
VMP1-217ENST00000593168 DBR1Q9UK59 544 aaKnown RBP14.97□□□□□ -0.01
VMP1-217ENST00000593168 MCM3APO60318 1980 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 SMTNL1A8MU46 457 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 BECN2A8MW95 431 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 DNM1LO00429 736 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 IKBKBO14920 756 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 SNAI1O95863 264 aaPredicted RBP14.96□□□□□ -0.01
VMP1-217ENST00000593168 SUPT20HL2P0C7V6 817 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 PPP1R2P41236 205 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 EHHADHQ08426 723 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 SHHQ15465 462 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 ARSHQ5FYA8 562 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 GJC2Q5T442 439 aaPredicted RBP14.96□□□□□ -0.01
VMP1-217ENST00000593168 TAPT1Q6NXT6 567 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 DYMQ7RTS9 669 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 LUZP1Q86V48 1076 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 DHX40Q8IX18 779 aaKnown RBP14.96□□□□□ -0.01
VMP1-217ENST00000593168 FBXO16Q8IX29 292 aaPredicted RBP14.96□□□□□ -0.01
VMP1-217ENST00000593168 PIGOQ8TEQ8 1089 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 ATP6V0A1Q93050 837 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 TINF2Q9BSI4 451 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 KATNBL1Q9H079 304 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 ABHD16BQ9H3Z7 469 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 ANKEF1Q9NU02 776 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 EXOC1Q9NV70 894 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 ATP11BQ9Y2G3 1177 aa14.96□□□□□ -0.01
VMP1-217ENST00000593168 LOXHD1Q8IVV2 1947 aa14.96□□□□□ -0.02
VMP1-217ENST00000593168 IGKV6D-21A0A0A0MT36 114 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 GSTTP1A0A1W2PQM5 241 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 FRMD3A2A2Y4 597 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 PPP1R3GB7ZBB8 358 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 MSCO60682 206 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 ARIH2O95376 493 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 GGPS1O95749 300 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 TXNP10599 105 aaKnown RBP14.95□□□□□ -0.02
VMP1-217ENST00000593168 CYBAP13498 195 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 GIT2Q14161 759 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 LY6KQ17RY6 165 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 COBLL1Q53SF7 1204 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 C9orf50Q5SZB4 431 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 CELF3Q5SZQ8 465 aaKnown RBP14.95□□□□□ -0.02
VMP1-217ENST00000593168 RINT1Q6NUQ1 792 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 SWSAP1Q6NVH7 229 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 C1orf186Q6ZWK4 172 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 CCDC65Q8IXS2 484 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 ENOX1Q8TC92 643 aaKnown RBP14.95□□□□□ -0.02
VMP1-217ENST00000593168 SEPT1Q8WYJ6 367 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 CDX2Q99626 313 aaPredicted RBP14.95□□□□□ -0.02
VMP1-217ENST00000593168 MLXIPQ9HAP2 919 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 GABBR1Q9UBS5 961 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 PRKAG2Q9UGJ0 569 aa14.95□□□□□ -0.02
VMP1-217ENST00000593168 CDH23Q9H251 3354 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 GOLGA6L19H0YKK7 550 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 ZBTB39O15060 712 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 KRT18P05783 430 aaKnown RBP14.94□□□□□ -0.02
VMP1-217ENST00000593168 IDEP14735 1019 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 YWHABP31946 246 aaKnown RBP14.94□□□□□ -0.02
VMP1-217ENST00000593168 DEKP35659 375 aaKnown RBP14.94□□□□□ -0.02
VMP1-217ENST00000593168 RARRES1P49788 294 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 NCAPHQ15003 741 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 UGCGQ16739 394 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 SLC39A5Q6ZMH5 540 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 OTUD6AQ7L8S5 288 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 ADSSL1Q8N142 457 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 PDGFCQ9NRA1 345 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 PANK4Q9NVE7 773 aa14.94□□□□□ -0.02
VMP1-217ENST00000593168 MAFBQ9Y5Q3 323 aaPredicted RBP14.94□□□□□ -0.02
VMP1-217ENST00000593168 DOCK5Q9H7D0 1870 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms