RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 GATMP50440 423 aa20.32■□□□□ 0.84
CIRBP-243ENST00000593128 ZNF746Q6NUN9 644 aaPredicted RBP20.32■□□□□ 0.84
CIRBP-243ENST00000593128 ZNF689Q96CS4 500 aaPredicted RBP20.32■□□□□ 0.84
CIRBP-243ENST00000593128 IGFLR1Q9H665 355 aa20.32■□□□□ 0.84
CIRBP-243ENST00000593128 EPHX3Q9H6B9 360 aa20.32■□□□□ 0.84
CIRBP-243ENST00000593128 CDHR5Q9HBB8 845 aa20.32■□□□□ 0.84
CIRBP-243ENST00000593128 ALG13Q9NP73 1137 aaKnown RBP20.32■□□□□ 0.84
CIRBP-243ENST00000593128 NOC2LQ9Y3T9 749 aaKnown RBP20.32■□□□□ 0.84
CIRBP-243ENST00000593128 SQORQ9Y6N5 450 aa20.32■□□□□ 0.84
CIRBP-243ENST00000593128 COL1A2P08123 1366 aa20.32■□□□□ 0.84
CIRBP-243ENST00000593128 DENND3A2RUS2 1198 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 CHMP2AO43633 222 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 VTNP04004 478 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 IFNAR1P17181 557 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 ATP4AP20648 1035 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 STK3Q13188 491 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 NTRK3Q16288 839 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 KIZQ2M2Z5 673 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 SPOUT1Q5T280 376 aaKnown RBP20.31■□□□□ 0.84
CIRBP-243ENST00000593128 RUFY3Q7L099 469 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 SMAP1Q8IYB5 467 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-243ENST00000593128 TRIM22Q8IYM9 498 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 KIAA0319LQ8IZA0 1049 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 CRYGNQ8WXF5 182 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 OSMRQ99650 979 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 C1QTNF1Q9BXJ1 281 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 TMX1Q9H3N1 280 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 RC3H2Q9HBD1 1191 aaKnown RBP20.31■□□□□ 0.84
CIRBP-243ENST00000593128 PCDHA10Q9Y5I2 948 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 CYP46A1Q9Y6A2 500 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 BRWD1Q9NSI6 2320 aa20.31■□□□□ 0.84
CIRBP-243ENST00000593128 BDP1A6H8Y1 2624 aa20.3■□□□□ 0.84
CIRBP-243ENST00000593128 C5orf67F2Z3F1 127 aa20.3■□□□□ 0.84
CIRBP-243ENST00000593128 CPLX1O14810 134 aa20.3■□□□□ 0.84
CIRBP-243ENST00000593128 LINC00271P0C7V0 271 aa20.3■□□□□ 0.84
CIRBP-243ENST00000593128 SSRP1Q08945 709 aaKnown RBP20.3■□□□□ 0.84
CIRBP-243ENST00000593128 CLUL1Q15846 466 aa20.3■□□□□ 0.84
CIRBP-243ENST00000593128 CMTR2Q8IYT2 770 aaKnown RBP20.3■□□□□ 0.84
CIRBP-243ENST00000593128 BBXQ8WY36 941 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-243ENST00000593128 CLP1Q92989 425 aaKnown RBP20.3■□□□□ 0.84
CIRBP-243ENST00000593128 PABPC5Q96DU9 382 aaKnown RBP20.3■□□□□ 0.84
CIRBP-243ENST00000593128 ERVK-5Q9HDB9 667 aa20.3■□□□□ 0.84
CIRBP-243ENST00000593128 PCDHB7Q9Y5E2 793 aa20.3■□□□□ 0.84
CIRBP-243ENST00000593128 KDM3AQ9Y4C1 1321 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 ZBTB42B2RXF5 422 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 MGEA5O60502 916 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 C22orf31O95567 290 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 CLCN3P51790 818 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 TOB2Q14106 344 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-243ENST00000593128 TMEM40Q8WWA1 233 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 KHSRPQ92945 711 aaKnown RBP eCLIP20.29■□□□□ 0.84
CIRBP-243ENST00000593128 GJA10Q969M2 543 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 ADAM2Q99965 735 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 AGXT2Q9BYV1 514 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 UPF3BQ9BZI7 483 aaKnown RBP20.29■□□□□ 0.84
CIRBP-243ENST00000593128 LMAN2LQ9H0V9 348 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 CD320Q9NPF0 282 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 ST3GAL5Q9UNP4 418 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 AKT3Q9Y243 479 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 MAFBQ9Y5Q3 323 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-243ENST00000593128 WDR81Q562E7 1941 aa20.29■□□□□ 0.84
CIRBP-243ENST00000593128 WDR64B1ANS9 1081 aa20.28■□□□□ 0.84
CIRBP-243ENST00000593128 MSH4O15457 936 aa20.28■□□□□ 0.84
CIRBP-243ENST00000593128 GAS7O60861 476 aa20.28■□□□□ 0.84
CIRBP-243ENST00000593128 ODR4Q5SWX8 454 aa20.28■□□□□ 0.84
CIRBP-243ENST00000593128 FBXL16Q8N461 479 aa20.28■□□□□ 0.84
CIRBP-243ENST00000593128 ZNF668Q96K58 619 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-243ENST00000593128 CEP131Q9UPN4 1083 aa20.28■□□□□ 0.84
CIRBP-243ENST00000593128 NCOR1O75376 2440 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 FAM86C2PA6NEL3 165 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 GRXCR2A6NFK2 248 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 TBKBP1A7MCY6 615 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 GPR182O15218 404 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 NEFLP07196 543 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 CIITAP33076 1130 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 GTF2F1P35269 517 aaKnown RBP eCLIP20.27■□□□□ 0.843e-6■■□□□ 12.9
CIRBP-243ENST00000593128 SARSP49591 514 aaKnown RBP20.27■□□□□ 0.84
CIRBP-243ENST00000593128 HYAL1Q12794 435 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 PUS10Q3MIT2 529 aaKnown RBP20.27■□□□□ 0.84
CIRBP-243ENST00000593128 LRCH2Q5VUJ6 765 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 FAM178BQ8IXR5 827 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 GJD3Q8N144 294 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 LRRC71Q8N4P6 559 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 KLHL23Q8NBE8 558 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 NEK9Q8TD19 979 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 TBCKQ8TEA7 893 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 LENG9Q96B70 501 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 FAM167AQ96KS9 214 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 SCLT1Q96NL6 688 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 PLVAPQ9BX97 442 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 TEKT3Q9BXF9 490 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 ZSWIM6Q9HCJ5 1215 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 DISC1Q9NRI5 854 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 PLAGL2Q9UPG8 496 aa20.27■□□□□ 0.84
CIRBP-243ENST00000593128 MMP1P03956 469 aa20.26■□□□□ 0.83
CIRBP-243ENST00000593128 OATP04181 439 aa20.26■□□□□ 0.83
CIRBP-243ENST00000593128 CRYBB1P53674 252 aaPredicted RBP20.26■□□□□ 0.83
CIRBP-243ENST00000593128 EFCAB12Q6NXP0 572 aa20.26■□□□□ 0.83
CIRBP-243ENST00000593128 CPLX2Q6PUV4 134 aaKnown RBP20.26■□□□□ 0.83
CIRBP-243ENST00000593128 FAM228AQ86W67 206 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms