RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TACO1Q9BSH4 297 aaKnown RBP13.73□□□□□ -0.21
DNMT1-228ENST00000592705 MIS12Q9H081 205 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 MEIS1O00470 390 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 MUM1Q2TAK8 710 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 SGO2Q562F6 1265 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 CATSPER4Q7RTX7 472 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 COL23A1Q86Y22 540 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-228ENST00000592705 DPF2Q92785 391 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 PLA2G12BQ9BX93 195 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 ST7Q9NRC1 585 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 RNF146Q9NTX7 359 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 TUBE1Q9UJT0 475 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 DR1Q01658 176 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 GRM4Q14833 912 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 HAUS1Q96CS2 278 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 FAM167AQ96KS9 214 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 FMO2Q99518 471 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 IL25Q9H293 177 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-228ENST00000592705 C19orf81C9J6K1 198 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 PIK3CAP42336 1068 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 IFNAR2P48551 515 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 NSUN6Q8TEA1 469 aaKnown RBP13.73□□□□□ -0.21
DNMT1-228ENST00000592705 CEP170P1Q96L14 293 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 MXD3Q9BW11 206 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 ANKFY1Q9P2R3 1169 aa13.73□□□□□ -0.21
DNMT1-228ENST00000592705 NOVA2Q9UNW9 492 aaKnown RBP13.73□□□□□ -0.21
DNMT1-228ENST00000592705 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-228ENST00000592705 RIMS1Q86UR5 1692 aaKnown RBP13.72□□□□□ -0.21
DNMT1-228ENST00000592705 CPS1P31327 1500 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 A0A1B0GTH6 734 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 PALMO75781 387 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 CYP2B6P20813 491 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 HMGCS2P54868 508 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 KRT81Q14533 505 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 AGBL3Q8NEM8 1001 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 RAD54LQ92698 747 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 NR2E3Q9Y5X4 410 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 TTC26A0AVF1 554 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 LRRC53A6NM62 1247 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 LRRN2O75325 713 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 MAGEA9P43362 315 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 ARHGEF18Q6ZSZ5 1173 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 TMEM47Q9BQJ4 181 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 ACAD9Q9H845 621 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 BCAP29Q9UHQ4 241 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 UTYO14607 1347 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 FRMPD1Q5SYB0 1578 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 MYO1CO00159 1063 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 CTIFO43310 598 aaKnown RBP13.72□□□□□ -0.21
DNMT1-228ENST00000592705 ACTN1P12814 892 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 ABCD1P33897 745 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 GTF2A2P52657 109 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 ALCAMQ13740 583 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 PRPF38AQ8NAV1 312 aaKnown RBP13.72□□□□□ -0.21
DNMT1-228ENST00000592705 URGCPQ8TCY9 931 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 DCAF4Q8WV16 495 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 WDR24Q96S15 920 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 DCP1AQ9NPI6 582 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-228ENST00000592705 LIMA1Q9UHB6 759 aaKnown RBP13.72□□□□□ -0.21
DNMT1-228ENST00000592705 LUC7L3O95232 432 aaKnown RBP13.72□□□□□ -0.21
DNMT1-228ENST00000592705 CYP2D6P10635 497 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 GGCXP38435 758 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 AP3B2Q13367 1082 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 RHOT2Q8IXI1 618 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 AP1M1Q9BXS5 423 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 UBE2TQ9NPD8 197 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-228ENST00000592705 SLC8A2Q9UPR5 921 aa13.72□□□□□ -0.21
DNMT1-228ENST00000592705 TARSL2A2RTX5 802 aaKnown RBP13.71□□□□□ -0.21
DNMT1-228ENST00000592705 NBPF26B4DH59 902 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 EVI5O60447 810 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 KCNA4P22459 653 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 PPP1R18Q6NYC8 613 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.21
DNMT1-228ENST00000592705 NBPF15Q8N660 670 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 KCNB2Q92953 911 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 ZMYND12Q9H0C1 365 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 ODF2LQ9ULJ1 636 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 HNRNPDLO14979 420 aaKnown RBP13.71□□□□□ -0.21
DNMT1-228ENST00000592705 KCNB1Q14721 858 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 FAM83BQ5T0W9 1011 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 SH3RF3Q8TEJ3 882 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-228ENST00000592705 PPP4R1Q8TF05 950 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 PLAAQ9Y263 795 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 ATP8B3O60423 1300 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 TECPR2O15040 1411 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 ORC4O43929 436 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 GMNNO75496 209 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 ANAPC5Q9UJX4 755 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 CAPN11Q9UMQ6 739 aa13.71□□□□□ -0.21
DNMT1-228ENST00000592705 GRID2IPA4D2P6 1211 aa13.71□□□□□ -0.22
DNMT1-228ENST00000592705 PSMD14O00487 310 aa13.71□□□□□ -0.22
DNMT1-228ENST00000592705 IRX4P78413 519 aa13.71□□□□□ -0.22
DNMT1-228ENST00000592705 C6orf118Q5T5N4 469 aa13.71□□□□□ -0.22
DNMT1-228ENST00000592705 MAP3K21Q5TCX8 1036 aa13.71□□□□□ -0.22
DNMT1-228ENST00000592705 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.22
DNMT1-228ENST00000592705 BARHL2Q9NY43 387 aa13.71□□□□□ -0.22
DNMT1-228ENST00000592705 RASGRF2O14827 1237 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms