RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 ZNF277Q9NRM2 450 aaPredicted RBP8.19□□□□□ -1.1
VMP1-215ENST00000592619 ADAMTS6Q9UKP5 1117 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 CTNND2Q9UQB3 1225 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 INVSQ9Y283 1065 aa8.19□□□□□ -1.1
VMP1-215ENST00000592619 ZC3H12DA2A288 527 aaKnown RBP8.18□□□□□ -1.1
VMP1-215ENST00000592619 XPOTO43592 962 aaKnown RBP8.18□□□□□ -1.1
VMP1-215ENST00000592619 MMEP08473 750 aa8.18□□□□□ -1.1
VMP1-215ENST00000592619 MANFP55145 182 aaKnown RBP8.18□□□□□ -1.1
VMP1-215ENST00000592619 PLCL1Q15111 1095 aa8.18□□□□□ -1.1
VMP1-215ENST00000592619 C7orf31Q8N865 590 aa8.18□□□□□ -1.1
VMP1-215ENST00000592619 TSPAN17Q96FV3 270 aa8.18□□□□□ -1.1
VMP1-215ENST00000592619 MAML3Q96JK9 1138 aa8.18□□□□□ -1.1
VMP1-215ENST00000592619 TEKT5Q96M29 485 aa8.18□□□□□ -1.1
VMP1-215ENST00000592619 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.17□□□□□ -1.1
VMP1-215ENST00000592619 F8W031 263 aaPredicted RBP8.17□□□□□ -1.1
VMP1-215ENST00000592619 MYL1P05976 194 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 RNASE1P07998 156 aaKnown RBP8.17□□□□□ -1.1
VMP1-215ENST00000592619 AGXTP21549 392 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 LPOP22079 712 aaPredicted RBP8.17□□□□□ -1.1
VMP1-215ENST00000592619 SSTR4P31391 388 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 MTNR1BP49286 362 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 HTRA3P83110 453 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 GRIN1Q05586 938 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 CLUL1Q15846 466 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 TIGD7Q6NT04 549 aaPredicted RBP8.17□□□□□ -1.1
VMP1-215ENST00000592619 EPM2AIP1Q7L775 607 aaPredicted RBP8.17□□□□□ -1.1
VMP1-215ENST00000592619 KCNK18Q7Z418 384 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 TICAM2Q86XR7 235 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 TGFBRAP1Q8WUH2 860 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 JADE3Q92613 823 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 SEMA4AQ9H3S1 761 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 DNAJC28Q9NX36 388 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 OBP2AQ9NY56 170 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 BTBD7Q9P203 1132 aa8.17□□□□□ -1.1
VMP1-215ENST00000592619 YBX2Q9Y2T7 364 aaKnown RBP8.17□□□□□ -1.1
VMP1-215ENST00000592619 UBA6A0AVT1 1052 aaPredicted RBP8.16□□□□□ -1.1
VMP1-215ENST00000592619 PLIN1O60240 522 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 ZRANB2O95218 330 aaKnown RBP eCLIP8.16□□□□□ -1.1
VMP1-215ENST00000592619 MPOP05164 745 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 MTHFD2P13995 350 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 AKAP5P24588 427 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 AOAHP28039 575 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 MRPS9P82933 396 aaKnown RBP8.16□□□□□ -1.1
VMP1-215ENST00000592619 DBPQ10586 325 aaPredicted RBP8.16□□□□□ -1.1
VMP1-215ENST00000592619 UBE4AQ14139 1066 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 ACAP2Q15057 778 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 UGT8Q16880 541 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 TTC38Q5R3I4 469 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 CILP2Q8IUL8 1156 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 CLIP3Q96DZ5 547 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 RXFP1Q9HBX9 757 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 PRDM11Q9NQV5 511 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 ZBTB21Q9ULJ3 1066 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 GPR45Q9Y5Y3 372 aa8.16□□□□□ -1.1
VMP1-215ENST00000592619 ELL2O00472 640 aaPredicted RBP8.15□□□□□ -1.1
VMP1-215ENST00000592619 ERC2O15083 957 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 PEX14O75381 377 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 IL33O95760 270 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 WNT11O96014 354 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 RRP12Q5JTH9 1297 aaKnown RBP8.15□□□□□ -1.1
VMP1-215ENST00000592619 MIB1Q86YT6 1006 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 SIRT2Q8IXJ6 389 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 ABHD4Q8TB40 342 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 EAF2Q96CJ1 260 aaPredicted RBP8.15□□□□□ -1.1
VMP1-215ENST00000592619 RAX2Q96IS3 184 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 FOXB1Q99853 325 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 ANO3Q9BYT9 981 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 POFUT1Q9H488 388 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 DTLQ9NZJ0 730 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 DBR1Q9UK59 544 aaKnown RBP8.15□□□□□ -1.1
VMP1-215ENST00000592619 PPP2R3BQ9Y5P8 575 aa8.15□□□□□ -1.1
VMP1-215ENST00000592619 VSTM5A8MXK1 200 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 MAPKAPK2P49137 400 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 GALK1P51570 392 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 RHBDL3P58872 404 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 PRR5P85299 388 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 SRSF2Q01130 221 aaKnown RBP8.14□□□□□ -1.11
VMP1-215ENST00000592619 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.14□□□□□ -1.11
VMP1-215ENST00000592619 CT83Q5H943 113 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 KANSL1Q7Z3B3 1105 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 TP53INP2Q8IXH6 220 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 FAM126BQ8IXS8 530 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 HIPK4Q8NE63 616 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 TOE1Q96GM8 510 aaKnown RBP8.14□□□□□ -1.11
VMP1-215ENST00000592619 TUBGCP5Q96RT8 1024 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 PSMD1Q99460 953 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 NUMBLQ9Y6R0 609 aa8.14□□□□□ -1.11
VMP1-215ENST00000592619 PRDM2Q13029 1718 aa8.13□□□□□ -1.11
VMP1-215ENST00000592619 PRSS38A1L453 326 aa8.13□□□□□ -1.11
VMP1-215ENST00000592619 PRAMEF22A3QJZ6 481 aa8.13□□□□□ -1.11
VMP1-215ENST00000592619 PRPF6O94906 941 aaKnown RBP8.13□□□□□ -1.11
VMP1-215ENST00000592619 PRLP01236 227 aa8.13□□□□□ -1.11
VMP1-215ENST00000592619 LRG1P02750 347 aa8.13□□□□□ -1.11
VMP1-215ENST00000592619 AFMP43652 599 aa8.13□□□□□ -1.11
VMP1-215ENST00000592619 ADKP55263 362 aaKnown RBP8.13□□□□□ -1.11
VMP1-215ENST00000592619 ALDH6A1Q02252 535 aaKnown RBP8.13□□□□□ -1.11
VMP1-215ENST00000592619 GBX1Q14549 363 aa8.13□□□□□ -1.11
VMP1-215ENST00000592619 ZNF792Q3KQV3 632 aa8.13□□□□□ -1.11
VMP1-215ENST00000592619 PITRM1Q5JRX3 1037 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms