RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 ERAP1Q9NZ08 941 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 PUF60Q9UHX1 559 aaKnown RBP11.7□□□□□ -0.54
SDF2-209ENST00000591903 PCDHB7Q9Y5E2 793 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 CYP46A1Q9Y6A2 500 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 TAF6LQ9Y6J9 622 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 DNAH14Q0VDD8 3507 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 EP300Q09472 2414 aaPredicted RBP11.69□□□□□ -0.54
SDF2-209ENST00000591903 FRMPD4Q14CM0 1322 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 SP100P23497 879 aaPredicted RBP11.69□□□□□ -0.54
SDF2-209ENST00000591903 MTHFRP42898 656 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 SARSP49591 514 aaKnown RBP11.69□□□□□ -0.54
SDF2-209ENST00000591903 ANTXR2P58335 489 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 ERVFC1P60507 584 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 PAK2Q13177 524 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 RABEP1Q15276 862 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 GRIK4Q16099 956 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 ADCK5Q3MIX3 580 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 RTN4RL1Q86UN2 441 aaPredicted RBP11.69□□□□□ -0.54
SDF2-209ENST00000591903 CCDC105Q8IYK2 499 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 ZDHHC14Q8IZN3 488 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 ENAHQ8N8S7 591 aaPredicted RBP11.69□□□□□ -0.54
SDF2-209ENST00000591903 IGDCC4Q8TDY8 1250 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 TNPO1Q92973 898 aaKnown RBP11.69□□□□□ -0.54
SDF2-209ENST00000591903 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 RTP3Q9BQQ7 232 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 ADAM7Q9H2U9 754 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 BCAS3Q9H6U6 928 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 NGRNQ9NPE2 291 aaKnown RBP11.69□□□□□ -0.54
SDF2-209ENST00000591903 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 PADI3Q9ULW8 664 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 FANCMQ8IYD8 2048 aa11.69□□□□□ -0.54
SDF2-209ENST00000591903 NID2Q14112 1375 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 DENND4AQ7Z401 1863 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 IGSF9BQ9UPX0 1349 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 RRN3P2A6NIE6 340 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 C2CD4DB7Z1M9 353 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 IFIT3O14879 490 aaKnown RBP11.68□□□□□ -0.54
SDF2-209ENST00000591903 PRC1O43663 620 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 LMNAP02545 664 aaKnown RBP11.68□□□□□ -0.54
SDF2-209ENST00000591903 CALM1P0DP23 149 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 CALM2P0DP24 149 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 CALM3P0DP25 149 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 LAG3P18627 525 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 AOC1P19801 751 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 TCF7P36402 384 aaPredicted RBP11.68□□□□□ -0.54
SDF2-209ENST00000591903 MRPS9P82933 396 aaKnown RBP11.68□□□□□ -0.54
SDF2-209ENST00000591903 PLCB3Q01970 1234 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 WTAPQ15007 396 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 ANGPT1Q15389 498 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 IFIT1BQ5T764 474 aaKnown RBP11.68□□□□□ -0.54
SDF2-209ENST00000591903 XRRA1Q6P2D8 792 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 FCHSD1Q86WN1 690 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 TDRD5Q8NAT2 981 aaKnown RBP11.68□□□□□ -0.54
SDF2-209ENST00000591903 COLGALT1Q8NBJ5 622 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 KCNG4Q8TDN1 519 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 MRPS27Q92552 414 aaKnown RBP11.68□□□□□ -0.54
SDF2-209ENST00000591903 POMKQ9H5K3 350 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 ENTPD7Q9NQZ7 604 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 TRPV2Q9Y5S1 764 aa11.68□□□□□ -0.54
SDF2-209ENST00000591903 KMT2BQ9UMN6 2715 aaPredicted RBP11.67□□□□□ -0.54
SDF2-209ENST00000591903 KDM3AQ9Y4C1 1321 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 SH2B2O14492 632 aaPredicted RBP11.67□□□□□ -0.54
SDF2-209ENST00000591903 DDAH1O94760 285 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 SEMA3FQ13275 785 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 ODR4Q5SWX8 454 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 MARCH8Q5T0T0 291 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 PLPP4Q5VZY2 271 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 CWF19L1Q69YN2 538 aaKnown RBP11.67□□□□□ -0.54
SDF2-209ENST00000591903 LLGL2Q6P1M3 1020 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 FLCNQ8NFG4 579 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
SDF2-209ENST00000591903 KIF2CQ99661 725 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 TCF25Q9BQ70 676 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 APOL5Q9BWW9 433 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 SMARCAD1Q9H4L7 1026 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 LY9Q9HBG7 655 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 C1orf112Q9NSG2 853 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 USTQ9Y2C2 406 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 EPG5Q9HCE0 2579 aa11.67□□□□□ -0.54
SDF2-209ENST00000591903 BAZ2BQ9UIF8 2168 aaKnown RBP11.67□□□□□ -0.54
SDF2-209ENST00000591903 WDR87Q6ZQQ6 2873 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 TBKBP1A7MCY6 615 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 KLRF2D3W0D1 207 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 PPP1R11O60927 126 aaPredicted RBP11.66□□□□□ -0.54
SDF2-209ENST00000591903 KRT37O76014 449 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 SMARCA1P28370 1054 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 PPM1AP35813 382 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 MCM2P49736 904 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 GATMP50440 423 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 SP4Q02446 784 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 KRT17Q04695 432 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 NLRX1Q86UT6 975 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 NME8Q8N427 588 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 DTWD2Q8NBA8 298 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 SEPT1Q8WYJ6 367 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 GLG1Q92896 1179 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 CDHR1Q96JP9 859 aa11.66□□□□□ -0.54
SDF2-209ENST00000591903 CELF4Q9BZC1 486 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms