RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CCDC43Q96MW1 224 aaKnown RBP11.31□□□□□ -0.6
BRCA1-227ENST00000591849 SCLT1Q96NL6 688 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 MAP7D2Q96T17 732 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 SLC9A7Q96T83 725 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 AKT3Q9Y243 479 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 TRPV2Q9Y5S1 764 aa11.31□□□□□ -0.6
BRCA1-227ENST00000591849 EML1O00423 815 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 ZNF862O60290 1169 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 CHRNA1P02708 482 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 AMHP03971 560 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 HSP90AA1P07900 732 aaKnown RBP11.3□□□□□ -0.6
BRCA1-227ENST00000591849 DNAJB2P25686 324 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 TRAPPC10P48553 1259 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 RABGGTBP53611 331 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 TMEM266Q2M3C6 531 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 MTERF2Q49AM1 385 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 ODR4Q5SWX8 454 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 EFCAB12Q6NXP0 572 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 OTUD6AQ7L8S5 288 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 TPH2Q8IWU9 490 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 APBB2Q92870 758 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 IFIH1Q9BYX4 1025 aaKnown RBP11.3□□□□□ -0.6
BRCA1-227ENST00000591849 CELF4Q9BZC1 486 aaKnown RBP11.3□□□□□ -0.6
BRCA1-227ENST00000591849 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-227ENST00000591849 SLC28A3Q9HAS3 691 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 IGSF9BQ9UPX0 1349 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 MYO9BQ13459 2157 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 VCANP13611 3396 aa11.3□□□□□ -0.6
BRCA1-227ENST00000591849 OR52Z1P0C646 297 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 PDCP20941 246 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 WDR5P61964 334 aaKnown RBP11.29□□□□□ -0.6
BRCA1-227ENST00000591849 CYP4A11Q02928 519 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 ORC2Q13416 577 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-227ENST00000591849 CTTNQ14247 550 aaKnown RBP11.29□□□□□ -0.6
BRCA1-227ENST00000591849 MBTPS1Q14703 1052 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 GPNMBQ14956 572 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 PLEKHG4Q58EX7 1191 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 FAM117BQ6P1L5 589 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 B3GNT9Q6UX72 402 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 HERC6Q8IVU3 1022 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 HSCBQ8IWL3 235 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 EXOC8Q8IYI6 725 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 KIAA0319LQ8IZA0 1049 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 MYOCDQ8IZQ8 938 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 USP38Q8NB14 1042 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 ERMNQ8TAM6 284 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 VWCEQ96DN2 955 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 DYDC2Q96IM9 177 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 CEP170P1Q96L14 293 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 PPP1R16BQ96T49 567 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 JPH2Q9BR39 696 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-227ENST00000591849 PBX4Q9BYU1 374 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 NKX2-4Q9H2Z4 354 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 ZSWIM4Q9H7M6 989 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 RGL1Q9NZL6 768 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 VAV3Q9UKW4 847 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 PCDHA11Q9Y5I1 949 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
BRCA1-227ENST00000591849 VPS37CA5D8V6 355 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-227ENST00000591849 K7ELQ4 463 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-227ENST00000591849 TLL1O43897 1013 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 UPP2O95045 317 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 C22orf31O95567 290 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 VTNP04004 478 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-227ENST00000591849 U2AF2P26368 475 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■□□ 19.1
BRCA1-227ENST00000591849 PBX2P40425 430 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 TECP42680 631 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 CLCN3P51790 818 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
BRCA1-227ENST00000591849 PAK2Q13177 524 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 LPIN1Q14693 890 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 KIZQ2M2Z5 673 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 XKR9Q5GH70 373 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 FBXO47Q5MNV8 452 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 LRRC71Q8N4P6 559 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 NEK9Q8TD19 979 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 MTMR9Q96QG7 549 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 EIF2AK1Q9BQI3 630 aaKnown RBP11.28□□□□□ -0.6
BRCA1-227ENST00000591849 SH2D3AQ9BRG2 576 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 LXNQ9BS40 222 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 NIFKQ9BYG3 293 aaKnown RBP11.28□□□□□ -0.6
BRCA1-227ENST00000591849 TMEM60Q9H2L4 133 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 SEMA6BQ9H3T3 888 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 ZNF576Q9H609 170 aa11.28□□□□□ -0.6
BRCA1-227ENST00000591849 TMEM265A0A087WTH1 108 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 ZBTB42B2RXF5 422 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 WNT7AO00755 349 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 RPS6KA5O75582 802 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 CD52P31358 61 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 POLGP54098 1239 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-227ENST00000591849 NLRP11P59045 1033 aaKnown RBP11.27□□□□□ -0.61
BRCA1-227ENST00000591849 DEFB103AP81534 67 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 CDC42EP1Q00587 391 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 MGAT3Q09327 533 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 CUL4AQ13619 759 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.61
BRCA1-227ENST00000591849 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms