RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 CDY2AQ9Y6F7 541 aa12.96□□□□□ -0.33
VMP1-211ENST00000591315 POTEMA6NI47 508 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 BAG4O95429 457 aaKnown RBP12.95□□□□□ -0.34
VMP1-211ENST00000591315 GHRP10912 638 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 RFC2P35250 354 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 CLCN3P51790 818 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 RABGGTBP53611 331 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 NPEPPSP55786 919 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 MRPS6P82932 125 aaKnown RBP12.95□□□□□ -0.34
VMP1-211ENST00000591315 DRP2Q13474 957 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 EPHA7Q15375 998 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 TARBP2Q15633 366 aaKnown RBP12.95□□□□□ -0.34
VMP1-211ENST00000591315 MTERF2Q49AM1 385 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 FAM26DQ5JW98 314 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 TAF2Q6P1X5 1199 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 ANO5Q75V66 913 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 SLFN12Q8IYM2 578 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 DBF4BQ8NFT6 615 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 SEPT9Q9UHD8 586 aaPredicted RBP12.95□□□□□ -0.34
VMP1-211ENST00000591315 PCDHA12Q9UN75 941 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
VMP1-211ENST00000591315 VPS37CA5D8V6 355 aaPredicted RBP12.94□□□□□ -0.34
VMP1-211ENST00000591315 ABCB7O75027 752 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 SLITRK3O94933 977 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 VTNP04004 478 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 OR52Z1P0C646 297 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 MYOGP15173 224 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 TECP42680 631 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 QARSP47897 775 aaKnown RBP12.94□□□□□ -0.34
VMP1-211ENST00000591315 PSMC5P62195 406 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 DEFB103AP81534 67 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
VMP1-211ENST00000591315 LPIN1Q14693 890 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 IL17AQ16552 155 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.94□□□□□ -0.343e-6■■■■□ 19.8
VMP1-211ENST00000591315 RPAINQ86UA6 219 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 METTL13Q8N6R0 699 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 LINC01465Q8N7H1 131 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 FAM167AQ96KS9 214 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 EIF2AK1Q9BQI3 630 aaKnown RBP12.94□□□□□ -0.34
VMP1-211ENST00000591315 LXNQ9BS40 222 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 AGO3Q9H9G7 860 aaKnown RBP12.94□□□□□ -0.34
VMP1-211ENST00000591315 NRBP2Q9NSY0 501 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 NOL7Q9UMY1 257 aaKnown RBP12.94□□□□□ -0.34
VMP1-211ENST00000591315 SLC4A7Q9Y6M7 1214 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 MICAL3Q7RTP6 2002 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 COL1A2P08123 1366 aa12.94□□□□□ -0.34
VMP1-211ENST00000591315 SMIM35A0A1B0GVV1 85 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 P4HBP07237 508 aaKnown RBP12.93□□□□□ -0.34
VMP1-211ENST00000591315 PFKMP08237 780 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 SYT1P21579 422 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 TRAPPC10P48553 1259 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 PTGDRQ13258 359 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 PLEKHG4Q58EX7 1191 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 XKR3Q5GH77 459 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 FBXO47Q5MNV8 452 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 EFCAB12Q6NXP0 572 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 FAM173BQ6P4H8 233 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 CNKSR3Q6P9H4 555 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 TPH2Q8IWU9 490 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 FAM161BQ96MY7 647 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 HSD17B14Q9BPX1 270 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 NIFKQ9BYG3 293 aaKnown RBP12.93□□□□□ -0.34
VMP1-211ENST00000591315 SUGCTQ9HAC7 445 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
VMP1-211ENST00000591315 GINS2Q9Y248 185 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 YBX2Q9Y2T7 364 aaKnown RBP12.93□□□□□ -0.34
VMP1-211ENST00000591315 CDH23Q9H251 3354 aa12.93□□□□□ -0.34
VMP1-211ENST00000591315 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.92□□□□□ -0.34
VMP1-211ENST00000591315 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.92□□□□□ -0.34
VMP1-211ENST00000591315 PP2D1A8MPX8 630 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 CAND2O75155 1236 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 MED24O75448 989 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 ARHGEF15O94989 841 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 SPATA31C1P0DKV0 1188 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
VMP1-211ENST00000591315 TMEM266Q2M3C6 531 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 RSPH3Q86UC2 560 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 TMEM40Q8WWA1 233 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 TNPO1Q92973 898 aaKnown RBP12.92□□□□□ -0.34
VMP1-211ENST00000591315 INTS4Q96HW7 963 aaKnown RBP12.92□□□□□ -0.34
VMP1-211ENST00000591315 PBX4Q9BYU1 374 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 CELF4Q9BZC1 486 aaKnown RBP12.92□□□□□ -0.34
VMP1-211ENST00000591315 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.92□□□□□ -0.34
VMP1-211ENST00000591315 TRPV2Q9Y5S1 764 aa12.92□□□□□ -0.34
VMP1-211ENST00000591315 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.91□□□□□ -0.34
VMP1-211ENST00000591315 ACTN1P12814 892 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
VMP1-211ENST00000591315 CDC25AP30304 524 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 CD52P31358 61 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 SMAD3P84022 425 aaKnown RBP12.91□□□□□ -0.34
VMP1-211ENST00000591315 ECM1Q16610 540 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 KIZQ2M2Z5 673 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 FAM117BQ6P1L5 589 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 HSCBQ8IWL3 235 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 PIGOQ8TEQ8 1089 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 LINC01599Q8WXQ3 324 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 TTYH1Q9H313 450 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms