RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 POTEBQ6S5H4 581 aa20.32■□□□□ 0.84
VAT1-208ENST00000590924 FAM184AQ8NB25 1140 aa20.32■□□□□ 0.84
VAT1-208ENST00000590924 DAGLBQ8NCG7 672 aa20.32■□□□□ 0.84
VAT1-208ENST00000590924 TRAPPC12Q8WVT3 735 aa20.32■□□□□ 0.84
VAT1-208ENST00000590924 AIFM3Q96NN9 605 aa20.32■□□□□ 0.84
VAT1-208ENST00000590924 PHF20Q9BVI0 1012 aa20.32■□□□□ 0.84
VAT1-208ENST00000590924 AGO3Q9H9G7 860 aaKnown RBP20.32■□□□□ 0.84
VAT1-208ENST00000590924 RWDD3Q9Y3V2 267 aa20.32■□□□□ 0.84
VAT1-208ENST00000590924 TRPV2Q9Y5S1 764 aa20.32■□□□□ 0.84
VAT1-208ENST00000590924 PLXNA4Q9HCM2 1894 aa20.32■□□□□ 0.84
VAT1-208ENST00000590924 IGSF9BQ9UPX0 1349 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 KDM3AQ9Y4C1 1321 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 SMIM35A0A1B0GVV1 85 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 FAM86B1E9PN63 330 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 C5orf67F2Z3F1 127 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 CCNE2O96020 404 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 FAM86B2P0C5J1 330 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 LINC00271P0C7V0 271 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 TRIM29Q14134 588 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 LEXMQ3ZCV2 418 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 JAKMIP3Q5VZ66 844 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 ABHD15Q6UXT9 468 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 PLA2G4DQ86XP0 818 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 BANK1Q8NDB2 785 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 ZNF689Q96CS4 500 aaPredicted RBP20.31■□□□□ 0.84
VAT1-208ENST00000590924 FTHL17Q9BXU8 183 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 PCDHA4Q9UN74 947 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 SMC3Q9UQE7 1217 aa20.31■□□□□ 0.84
VAT1-208ENST00000590924 DHX15O43143 795 aaKnown RBP20.3■□□□□ 0.84
VAT1-208ENST00000590924 HBP1O60381 514 aa20.3■□□□□ 0.84
VAT1-208ENST00000590924 RB1P06400 928 aa20.3■□□□□ 0.84
VAT1-208ENST00000590924 CD52P31358 61 aa20.3■□□□□ 0.84
VAT1-208ENST00000590924 CTNNB1P35222 781 aa20.3■□□□□ 0.84
VAT1-208ENST00000590924 FAM160B1Q5W0V3 765 aa20.3■□□□□ 0.84
VAT1-208ENST00000590924 CCDC60Q8IWA6 550 aaPredicted RBP20.3■□□□□ 0.84
VAT1-208ENST00000590924 REXO1Q8N1G1 1221 aaKnown RBP20.3■□□□□ 0.84
VAT1-208ENST00000590924 LINC01599Q8WXQ3 324 aa20.3■□□□□ 0.84
VAT1-208ENST00000590924 CLP1Q92989 425 aaKnown RBP20.3■□□□□ 0.84
VAT1-208ENST00000590924 COL1A2P08123 1366 aa20.3■□□□□ 0.84
VAT1-208ENST00000590924 DDX39AO00148 427 aaKnown RBP20.29■□□□□ 0.84
VAT1-208ENST00000590924 IPO5O00410 1097 aaKnown RBP20.29■□□□□ 0.84
VAT1-208ENST00000590924 DGKIO75912 1065 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 COL9A1P20849 921 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 KCNA5P22460 613 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 SETQ01105 290 aaPredicted RBP20.29■□□□□ 0.84
VAT1-208ENST00000590924 TMEM62Q0P6H9 643 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 MTHFD1LQ6UB35 978 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 BLIDQ8IZY5 108 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 NME8Q8N427 588 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 ATP8B4Q8TF62 1192 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 C11orf84Q9BUA3 381 aaPredicted RBP20.29■□□□□ 0.84
VAT1-208ENST00000590924 C1QTNF1Q9BXJ1 281 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 CELF4Q9BZC1 486 aaKnown RBP20.29■□□□□ 0.84
VAT1-208ENST00000590924 NSUN3Q9H649 340 aaKnown RBP20.29■□□□□ 0.84
VAT1-208ENST00000590924 PADI3Q9ULW8 664 aa20.29■□□□□ 0.84
VAT1-208ENST00000590924 BACH1O14867 736 aa20.28■□□□□ 0.84
VAT1-208ENST00000590924 GJB2P29033 226 aa20.28■□□□□ 0.84
VAT1-208ENST00000590924 BMPR1AP36894 532 aa20.28■□□□□ 0.84
VAT1-208ENST00000590924 COL19A1Q14993 1142 aa20.28■□□□□ 0.84
VAT1-208ENST00000590924 NPY5RQ15761 445 aa20.28■□□□□ 0.84
VAT1-208ENST00000590924 CRIPAKQ8N1N5 446 aa20.28■□□□□ 0.84
VAT1-208ENST00000590924 FBXO18Q8NFZ0 1043 aa20.28■□□□□ 0.84
VAT1-208ENST00000590924 C8orf76Q96K31 380 aa20.28■□□□□ 0.84
VAT1-208ENST00000590924 LMAN2LQ9H0V9 348 aa20.28■□□□□ 0.84
VAT1-208ENST00000590924 M0R2N6 131 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 ADAMTS3O15072 1205 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 DTNBO60941 627 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 KLRC1P26715 233 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 KRT76Q01546 638 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 PAK2Q13177 524 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 BTG3Q14201 252 aaPredicted RBP20.27■□□□□ 0.84
VAT1-208ENST00000590924 BECN1Q14457 450 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 TCEAL5Q5H9L2 206 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 ZNF746Q6NUN9 644 aaPredicted RBP20.27■□□□□ 0.84
VAT1-208ENST00000590924 MIS18BP1Q6P0N0 1132 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 PDXDC2PQ6P474 469 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 FAM43BQ6ZT52 329 aaPredicted RBP20.27■□□□□ 0.84
VAT1-208ENST00000590924 RTN4RL1Q86UN2 441 aaPredicted RBP20.27■□□□□ 0.84
VAT1-208ENST00000590924 NPAS4Q8IUM7 802 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.27■□□□□ 0.84
VAT1-208ENST00000590924 PABPC5Q96DU9 382 aaKnown RBP20.27■□□□□ 0.84
VAT1-208ENST00000590924 BRMS1Q9HCU9 246 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 ZNF302Q9NR11 478 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 TBC1D22BQ9NU19 505 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 KCNJ14Q9UNX9 436 aa20.27■□□□□ 0.84
VAT1-208ENST00000590924 MMP1P03956 469 aa20.26■□□□□ 0.83
VAT1-208ENST00000590924 ZNF484Q5JVG2 852 aa20.26■□□□□ 0.83
VAT1-208ENST00000590924 CMTR2Q8IYT2 770 aaKnown RBP20.26■□□□□ 0.83
VAT1-208ENST00000590924 NEK9Q8TD19 979 aa20.26■□□□□ 0.83
VAT1-208ENST00000590924 ZNF577Q9BSK1 485 aa20.26■□□□□ 0.83
VAT1-208ENST00000590924 PLVAPQ9BX97 442 aa20.26■□□□□ 0.83
VAT1-208ENST00000590924 ATP4AP20648 1035 aa20.25■□□□□ 0.83
VAT1-208ENST00000590924 PDCP20941 246 aa20.25■□□□□ 0.83
VAT1-208ENST00000590924 CIITAP33076 1130 aa20.25■□□□□ 0.83
VAT1-208ENST00000590924 SAFBQ15424 915 aaKnown RBP eCLIP20.25■□□□□ 0.83
VAT1-208ENST00000590924 PUS10Q3MIT2 529 aaKnown RBP20.25■□□□□ 0.83
VAT1-208ENST00000590924 SWSAP1Q6NVH7 229 aa20.25■□□□□ 0.83
VAT1-208ENST00000590924 KRT25Q7Z3Z0 450 aa20.25■□□□□ 0.83
VAT1-208ENST00000590924 SMAP1Q8IYB5 467 aaPredicted RBP20.25■□□□□ 0.83
VAT1-208ENST00000590924 GJB4Q9NTQ9 266 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms