RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 OATP04181 439 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 HMGN5P82970 282 aaKnown RBP13.6□□□□□ -0.23
TPM4-212ENST00000590180 PRKCEQ02156 737 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 UGCGQ16739 394 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 FBXO47Q5MNV8 452 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 EFCAB12Q6NXP0 572 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 KIAA0319LQ8IZA0 1049 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 TNFRSF25Q93038 417 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 AGO3Q9H9G7 860 aaKnown RBP13.6□□□□□ -0.23
TPM4-212ENST00000590180 SUGCTQ9HAC7 445 aa13.6□□□□□ -0.23
TPM4-212ENST00000590180 LAMA2P24043 3122 aaKnown RBP13.59□□□□□ -0.23
TPM4-212ENST00000590180 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.59□□□□□ -0.23
TPM4-212ENST00000590180 ZBTB42B2RXF5 422 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 EML1O00423 815 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 ENPP3O14638 875 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 TBX3O15119 743 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 C22orf31O95567 290 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 TMOD1P28289 359 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 CD52P31358 61 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 NFX1Q12986 1120 aaKnown RBP13.59□□□□□ -0.23
TPM4-212ENST00000590180 GNL2Q13823 731 aaKnown RBP13.59□□□□□ -0.23
TPM4-212ENST00000590180 TSHZ1Q6ZSZ6 1077 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 USP38Q8NB14 1042 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 BANK1Q8NDB2 785 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 MAFAQ8NHW3 353 aaPredicted RBP13.59□□□□□ -0.23
TPM4-212ENST00000590180 PPM1EQ8WY54 764 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 ARNTL2Q8WYA1 636 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 HAS1Q92839 578 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 PPP1R16BQ96T49 567 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 KCNMB3Q9NPA1 279 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 INSL6Q9Y581 213 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 MYH9P35579 1960 aaKnown RBP13.59□□□□□ -0.23
TPM4-212ENST00000590180 IGSF9BQ9UPX0 1349 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 TANC1Q9C0D5 1861 aa13.59□□□□□ -0.23
TPM4-212ENST00000590180 LCHNA4D1U4 455 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 RFXAPO00287 272 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 PSMC5P62195 406 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 TAP1Q03518 808 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 MTERF2Q49AM1 385 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 XKR3Q5GH77 459 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 B3GNT9Q6UX72 402 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 SLFN12Q8IYM2 578 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 TOP1MTQ969P6 601 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 CDHR5Q9HBB8 845 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 SEPT9Q9UHD8 586 aaPredicted RBP13.58□□□□□ -0.24
TPM4-212ENST00000590180 AKT3Q9Y243 479 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 SQORQ9Y6N5 450 aa13.58□□□□□ -0.24
TPM4-212ENST00000590180 DKC1O60832 514 aaKnown RBP eCLIP13.57□□□□□ -0.24
TPM4-212ENST00000590180 RPS6KA5O75582 802 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 ARHGEF15O94989 841 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 VTNP04004 478 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 P4HBP07237 508 aaKnown RBP13.57□□□□□ -0.24
TPM4-212ENST00000590180 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
TPM4-212ENST00000590180 TXKP42681 527 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 QARSP47897 775 aaKnown RBP13.57□□□□□ -0.24
TPM4-212ENST00000590180 CLCN3P51790 818 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 TBC1D8BQ0IIM8 1120 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 PAK2Q13177 524 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 PPP2R5CQ13362 524 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 EPHA7Q15375 998 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 CCDC85BQ15834 202 aaPredicted RBP13.57□□□□□ -0.24
TPM4-212ENST00000590180 CALCRLQ16602 461 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 TMEM266Q2M3C6 531 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 LRRC71Q8N4P6 559 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 IL27Q8NEV9 243 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 FBXO18Q8NFZ0 1043 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 MAP7D2Q96T17 732 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 YME1L1Q96TA2 773 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 SH2D3AQ9BRG2 576 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 NIFKQ9BYG3 293 aaKnown RBP13.57□□□□□ -0.24
TPM4-212ENST00000590180 VAV3Q9UKW4 847 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 PADI3Q9ULW8 664 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 PCDHA12Q9UN75 941 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 EVPLQ92817 2033 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 KDM3AQ9Y4C1 1321 aa13.57□□□□□ -0.24
TPM4-212ENST00000590180 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 STBD1O95210 358 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 CRYBB1P53674 252 aaPredicted RBP13.56□□□□□ -0.24
TPM4-212ENST00000590180 NLRP11P59045 1033 aaKnown RBP13.56□□□□□ -0.24
TPM4-212ENST00000590180 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
TPM4-212ENST00000590180 ADGRE1Q14246 886 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 ZNF174Q15697 407 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 ODR4Q5SWX8 454 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 RTN4RL1Q86UN2 441 aaPredicted RBP13.56□□□□□ -0.24
TPM4-212ENST00000590180 TMX3Q96JJ7 454 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 ZNF668Q96K58 619 aaPredicted RBP13.56□□□□□ -0.24
TPM4-212ENST00000590180 TBC1D32Q96NH3 1257 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 OSMRQ99650 979 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 FTHL17Q9BXU8 183 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 MTUS1Q9ULD2 1270 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 ST3GAL5Q9UNP4 418 aa13.56□□□□□ -0.24
TPM4-212ENST00000590180 NOC2LQ9Y3T9 749 aaKnown RBP13.56□□□□□ -0.24
TPM4-212ENST00000590180 GPR182O15218 404 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
TPM4-212ENST00000590180 NEMFO60524 1076 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 MCM7P33993 719 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 MCM2P49736 904 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms