RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 PPP1R16BQ96T49 567 aa14.68□□□□□ -0.06
NEDD4L-227ENST00000590020 PCYT2Q99447 389 aa14.68□□□□□ -0.06
NEDD4L-227ENST00000590020 NOC2LQ9Y3T9 749 aaKnown RBP14.68□□□□□ -0.06
NEDD4L-227ENST00000590020 HCFC2Q9Y5Z7 792 aa14.68□□□□□ -0.06
NEDD4L-227ENST00000590020 R4GN57 208 aa14.68□□□□□ -0.06
NEDD4L-227ENST00000590020 AOC1P19801 751 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 PDE4AP27815 886 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 PDE1AP54750 535 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 KRT76Q01546 638 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 PLCB4Q15147 1175 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 ANKRD45Q5TZF3 282 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 PCNX4Q63HM2 1172 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 LRRC55Q6ZSA7 311 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 DTWD2Q8NBA8 298 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 SMARCC2Q8TAQ2 1214 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 TMEM40Q8WWA1 233 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 RIN2Q8WYP3 895 aaPredicted RBP14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 CASP10Q92851 521 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 HINFPQ9BQA5 517 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 SMARCAD1Q9H4L7 1026 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 RIOX1Q9H6W3 641 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 ERVK-5Q9HDB9 667 aa14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 PUF60Q9UHX1 559 aaKnown RBP14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 DBR1Q9UK59 544 aaKnown RBP14.67□□□□□ -0.06
NEDD4L-227ENST00000590020 CACNA1BQ00975 2339 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 WDR87Q6ZQQ6 2873 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 PNMA6FA0A0J9YX94 578 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 RRN3P2A6NIE6 340 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 LMNAP02545 664 aaKnown RBP14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 LAG3P18627 525 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 PLCB3Q01970 1234 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 ITIH3Q06033 890 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 SEC23AQ15436 765 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 CYB5R4Q7L1T6 521 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 SIX5Q8N196 739 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 DCLK2Q8N568 766 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 GIMAP8Q8ND71 665 aaPredicted RBP14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 NECTIN4Q96NY8 510 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 SENP2Q9HC62 589 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 NGRNQ9NPE2 291 aaKnown RBP14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 RGS18Q9NS28 235 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 LZTS1Q9Y250 596 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 PCDHA2Q9Y5H9 948 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 ZNF292O60281 2723 aa14.66□□□□□ -0.06
NEDD4L-227ENST00000590020 ZFHX4Q86UP3 3567 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 C2orf71A6NGG8 1288 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 C9IYK1 514 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 CLASP2O75122 1294 aaKnown RBP14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 RPS6KA5O75582 802 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 ITGB5P18084 799 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 MTHFRP42898 656 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 GRM4Q14833 912 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 KCNT2Q6UVM3 1135 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 SLC24A5Q71RS6 500 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 ZDHHC14Q8IZN3 488 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 ATP6V0A4Q9HBG4 840 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 FBXL21Q9UKT6 434 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 ST3GAL5Q9UNP4 418 aa14.65□□□□□ -0.06
NEDD4L-227ENST00000590020 EP300Q09472 2414 aaPredicted RBP14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 MTHFD1LQ6UB35 978 aa14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 CWC27Q6UX04 472 aaKnown RBP14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 CYP2W1Q8TAV3 490 aa14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 AUTS2Q8WXX7 1259 aa14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 GPRASP2Q96D09 838 aa14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 CASD1Q96PB1 797 aa14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 KRT23Q9C075 422 aa14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 C1orf112Q9NSG2 853 aa14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 ZBTB47Q9UFB7 747 aaPredicted RBP14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 KDM3AQ9Y4C1 1321 aa14.64□□□□□ -0.07
NEDD4L-227ENST00000590020 NCOR2Q9Y618 2525 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 SMIM35A0A1B0GVV1 85 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 NT5C1B-RDH14C9J2C7 533 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 STK25O00506 426 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 MEIS2O14770 477 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 NARSO43776 548 aaKnown RBP14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 EOMESO95936 686 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 EPCAMP16422 314 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 SDSP20132 328 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 KRT17Q04695 432 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 TRAF1Q13077 416 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 PUM1Q14671 1186 aaKnown RBP eCLIP14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 SMC1AQ14683 1233 aaKnown RBP14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 MRPL43Q8N983 215 aaKnown RBP14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 CUL5Q93034 780 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 ZNF558Q96NG5 402 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 RTP3Q9BQQ7 232 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 AZI2Q9H6S1 392 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 CYP26B1Q9NR63 512 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 RNF19AQ9NV58 838 aa14.63□□□□□ -0.07
NEDD4L-227ENST00000590020 RPLP2P05387 115 aaKnown RBP14.62□□□□□ -0.07
NEDD4L-227ENST00000590020 MTMR1Q13613 665 aa14.62□□□□□ -0.07
NEDD4L-227ENST00000590020 IMMTQ16891 758 aaKnown RBP14.62□□□□□ -0.07
NEDD4L-227ENST00000590020 ATAT1Q5SQI0 421 aa14.62□□□□□ -0.07
NEDD4L-227ENST00000590020 KIAA1841Q6NSI8 718 aa14.62□□□□□ -0.07
NEDD4L-227ENST00000590020 XRRA1Q6P2D8 792 aa14.62□□□□□ -0.07
NEDD4L-227ENST00000590020 TMC5Q6UXY8 1006 aa14.62□□□□□ -0.07
NEDD4L-227ENST00000590020 FAM228AQ86W67 206 aa14.62□□□□□ -0.07
NEDD4L-227ENST00000590020 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
NEDD4L-227ENST00000590020 OSMRQ99650 979 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms